Pseudomonas stutzeri SLG510A3-8, AB691_RS06115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48557
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019619 3,4-dihydroxybenzoate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02426
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc inosine-5'-phosphate biosynthesis I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc inosine-5'-phosphate biosynthesis II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc adenosine ribonucleotides <i>de novo</i> biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc inosine-5'-phosphate biosynthesis III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 233 260 1.1E-25
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 278 294 1.1E-25
CDD cd01597 pCLME - - 8 447 0.0
SUPERFAMILY SSF48557 L-aspartase-like IPR008948 L-Aspartase-like 8 448 1.88E-124
Gene3D G3DSA:1.10.40.30 - - - 365 452 4.5E-30
PRINTS PR00145 Argininosuccinate lyase family signature - - 102 124 1.2E-11
Pfam PF10397 Adenylosuccinate lyase C-terminus IPR019468 Adenylosuccinate lyase C-terminal 367 444 1.5E-20
Pfam PF00206 Lyase IPR022761 Fumarate lyase, N-terminal 16 303 6.0E-69
SMART SM00998 ADSL_C_2 IPR019468 Adenylosuccinate lyase C-terminal 366 445 7.1E-31
FunFam G3DSA:1.20.200.10:FF:000014 3-carboxy-cis,cis-muconate cycloisomerase - - 1 363 0.0
PRINTS PR00145 Argininosuccinate lyase family signature - - 233 257 1.2E-11
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 148 166 1.1E-25
PRINTS PR00145 Argininosuccinate lyase family signature - - 143 163 1.2E-11
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 103 121 1.1E-25
NCBIfam TIGR02426 JCVI: 3-carboxy-cis,cis-muconate cycloisomerase IPR012789 3-carboxy-cis,cis-muconate cycloisomerase-like 8 346 0.0
FunFam G3DSA:1.10.40.30:FF:000007 Adenylosuccinate lyase - - 366 447 8.9E-23
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain) - - 2 361 3.9E-119
PANTHER PTHR43172 ADENYLOSUCCINATE LYASE - - 6 451 8.3E-118
PRINTS PR00145 Argininosuccinate lyase family signature - - 278 294 1.2E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.