Strain | Pseudomonas stutzeri strain SLG510A3-8, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGCTGATCGCCGCTGAACTGAACCGTCCACACGGTTCGCTGCGCAGCGTTGCCGAAGCGCTCGGCCTGCCGCGCAAGACACTGCATGACAAGCTGCGCAA GCATGGCCTGAGCTTTACCGATGCTGGCGGAAGCTCGCCCGACGAAAACGACTAGATGGCGGAAATCCGCCATCCTTGACCGCCGCATCGGGCCTCGACT GCCAATCTCGGCCCTCCCTGCAATGCCAACCGCGGATGGCCTGCTCACCCCGCGCAAAGGTGCGACCTAGACGCGCTTGTTGGCAATTGGCCATTCAAAC CTTCATCTATTGCTGGGTAAACTCGCTGGCTTCAGGTGCCTGTGCCAGCGGTTGGCACAGGCATTGCTCCTGAAACCCGATGAACCGGATGGATCGAGTC GCGATCGTGCATCGCATCCAGGCCATTGCGCCTAGACTTGCCCAGCTGGTTACTGCCGGGATGCCCCGAGGCCTCCCACCCACAACAAGAGGAAACATCA
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DNA Sequence for Gene |
>AB691_RS00405
ATGTTCAAACTGACTGCCAAGGCGCTGGCATGCGCCCTGTCGCTGAGCATCGCTGGTCTGGCCCACGCGGCTGACCCGATCACCATCAAGTTCTCTCACG TGGTCGCCGAGAACACGCCGAAAGGCCAGGGCGCCCTGATGTTCAAGAAGCTGGTGGAAGAGCGTCTGGCCGGCAAGGTCGAGGTACAGGTTTACCCGAA CTCCTCGCTGTTCGGCGATGGCAAGGAAATGGAAGCCCTGCTGCTGGGCGACGTTCAGCTGATCGCGCCGTCGCTGGCCAAGTTCGAACACTACTCCAAG GGCGTTCAGGTCTTCGACCTGCCGTTCCTGTTCGACGACATCGCAGCGGTCGACCGCTTCCAGCAAGGTGAAGCCGGCCAGAGCCTGCTGCGCTCGATGG AAGACAAGAACATCACCGGCCTGGGCTACTGGCACAACGGCATGAAGCAGCTGTCGGCCAACAAGCCGCTGCGCGAGCCGAAGGACGCCCGTGGTCTGAA GTTCCGCGTACAGGCTTCCGCCGTGCTGGACGAGCAGTTCAAGGCCGTGCGCGCCAACCCGCGCAAGATGAGCTTCGCCGAGGTCTACCAGGGCCTGCAG ACTGGCGTGGTCAACGGTGCCGAGAACCCCTACTCGAACATCTACTCGCAGAAGATGCACGAAGTGCAGAAGTACATCACCGAGTCCAACCACGGTCTGC TGGACTACATGGTGATCACCAACACCAAGTTCTGGAACGGTCTGCCGGCTGACGTACGCGGCGAGCTGGAAAAGATCCTGGACGAAGTGACCGTCGCGGT GAACAAGCAGGCTGACGAGCTGAACCAGGCCGACAAGCAGCGCATCATCGACGCCGGCACCACCGAGATCATCGACCTGACTCCGGAGCAGCGCGAAATG TGGCGCGAAGCCATGAAGCCGGTCTGGAAGAAGTTCGAAGGCGAAATCGGTGCCGACCTGATCAAGGCCGCCGAAGCCGCCAACCAGGCTAACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCTTTGCCGAGGGGCGGCCACCCCGCTCCTCGGCTGTACCACCCAGCGATACCCGACAGCTCAGTGAAAAAACAAAGCCGCTAGCGAAGACCAGGCCCG CACCAAGGGCAGGAAGGCCATGCCGAGGTGATCCCGGGCTGGGCCGCTTCACTGGCCACAACAAGAGTTTTTCATTGCTCTGTCTCCCAGCCTGCCCCGG CTGGTTCACGGCGCACCTCCGTGCTGCCTTTCGATACAACCGCAGTCCATCGGGAGATGTCATCCATGAACGCCCTCTGGCGCGTCTGGGACCACTTCGA GGAAGGCTTCATCGCCTTTCTGCTGGCCGCCATGACACTGGTGACCTTCGTCTACGTGATCCTCAACAACCTCTACACGCTGTTCTACGACTTGGGCGAC CGCTTCGAAGGCACCGCCGACTTCTGGTTCGCCATCGGTGACTTCATCATCGGTCTGGCCCAGTCCATGACCTGGAGCACCGCGCTGACCAAGGCGCTGT
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Amino Acid Sequence |
>C4-dicarboxylate ABC transporter
MFKLTAKALACALSLSIAGLAHAADPITIKFSHVVAENTPKGQGALMFKKLVEERLAGKVEVQVYPNSSLFGDGKEMEALLLGDVQLIAPSLAKFEHYSK GVQVFDLPFLFDDIAAVDRFQQGEAGQSLLRSMEDKNITGLGYWHNGMKQLSANKPLREPKDARGLKFRVQASAVLDEQFKAVRANPRKMSFAEVYQGLQ TGVVNGAENPYSNIYSQKMHEVQKYITESNHGLLDYMVITNTKFWNGLPADVRGELEKILDEVTVAVNKQADELNQADKQRIIDAGTTEIIDLTPEQREM WREAMKPVWKKFEGEIGADLIKAAEAANQAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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