Pseudomonas stutzeri NT0128, UF78_RS11195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 79_126962_15046637, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCTGCTGGCCTTCCTGGTGCTGGCTGCGCAATACGAGAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATTGTGCCCATGACCCTGCTGTCGGCGATCA CCGGCGTGATTCTGTCCGGTGGCGACAACAACGTGTTCACCCAGATCGGACTGATCGTGCTGGTCGGACTGGCGTGCAAGAACGCGATCCTCATCGTCGA GTTCGCCAAGGACAAACAGGAAGAAGGCATGGACCGTCTGGCCGCTGTGCTGGAGGCCTGCCGGTTGCGGCTGCGGCCAATCCTGATGACCAGCTTCGCC TTCATCATGGGCGTGGTGCCGCTGGTGTTGTCCTCCGGCGCGGGCGCTGAGATGCGTCATGCCATGGGTGTCGCGGTGTTCAGCGGGATGCTCGGCGTGA CCTTCTTCGGGCTGCTGTTGACCCCGGTGTTCTACCTGGTGATTCGCGCCTTCGTTGAGAAGCGCGAGGAGAAAAAGGCTGTACTGAAGGAGTCCCATGC
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| DNA Sequence for Gene |
>UF78_RS11195
ATGAAAGCTGTCTTACTGCTTGCCGCGATCTTCACCTTGAGCGCGTGCGCCGTCGGCCCGGATTACCGGACGCCCGAAACGGCTCCAGCCAAGATTGAGC GAGCCAACGCCGAGGGTTTCGACCGCTCGCGCTTCGAATCCGCCTGGTGGCGTCAGTTCGACGACTCGACACTCGATGCGCTGGTCGGCGAGGCATTGTC GGAGAACCGCGAGTTGCGCATCGCCTTCGCCAGGTTACGCGCGGCGCGGTCGATTCGTGATGACGCGGCCAATGATCGTTTCCCGACCGTGACTGCCGGT GCCAGCGCCGAGTACGGCAAGGCTCAGCAGCCGGGTACTAGCGAGGAACGTAGCAATATCGAGCGTTACGATCTGGGTCTGGACATGGCCTGGGAGCTGG ATCTGTTCGGGCGCATCCAACGCCGCATCGAGTCCAGCGAGGCACAAAGCGAGGCCGCAGAAGCCGAGCTCTATCAGCTACAGGTCAGCCTGATCGCCGA ACTGGTGGATGCCTATGGCCAACTGCGTGGTGCGCAGCTGCGCGAGCGTATCGCCCGGGAAAACCTCGCCAATCAACGCGAGTCGCATCAACTGACCGAG CAGCTGCGCGAAGCCGGTATGGGCAGCGAATTGGATGTGTTGCGTGCCGATGCTCGTTTGGCCGCCACCGAAGCCAGCTTGCCGCAACTGCAAGCGACAC AGACCCGCGCGCGCAATCGCATCGCCACCCTCCTCGGCCAGCGTCCGGAGCAACTCAGTGTCGACCTTTCGCCTCGCAAGCTGCCGGCAATAGCCAAGGC ATTGCCGATCGGCGATCCCGGCGAACTGCTGCGCCGCCGCCCGGACATTCTTTCCGCCGAACGGCAACTGGCGGCCGCCACCGCTAACGTCGGCGTGGCG ACGGCCGATCTGTTCCCGCGGGTAAGCCTGTCGGGCTTCCTTGGGTTCATTGCAGGTCGTGGCTCGCAGATCGGCTCGAGCGCTGCACAAGCCTGGGGGG TGGCGCCGAGCATCAGCTGGGCGGCATTCGACATGGGCAGCGTCCGGGCTCGCTTGCGCGGTGCCGAAGCGGATGCCGAAGGCGCGTTGGCGAACTACGA GCAACAAGTTCTGCTCGCGCTGGAAGAATCGGAAAATGCGTTCAGTGACTATGCCCGTGCTCAGGAGCGGCTGCTGGCGTTGTTACGCCAATCCAGCGCC AGCCGCGCTGCTGCGCAACAGGCGCAGATTCGCTACCGGGAAGGCACCGTGGACTTCCTGGTGCTATTGGATGCCGAGCGTGAGCGCCTCACCGCCGAGG ACGCCCAAGCGCTGGCCGAAGTGGATCTGTACCGTGGAATCGTCGCGCTTTATAAAGCGCTGGGCGGCGGCTGGCAGCTGGCAGCTGGCCAGCGGTTGAC CTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACAGCTCTGCGCCGTTGCTTCGGCGCAGAGCTGCGAGGCAAGCGGCAAACTGTGATCCATGCCCGCTCCCGTTCATCCAATCATGAATTTTGCGAGAAA GCGCTTTAGGTGGTTCGGCTTATTTGGCATAACTCCCCGTTGAAGCTCAATCGCGTCCTCGGACGCAATGCCAACCAACCAAAATAAAGAGCCTTTCAAT GATCAAGCCGATCATCACCCTCGCCGGTCTGGTGCTGGCGCTAACCGCGACCGCCGTCGAGGCCGAGCCGATTGTCATCAAGTTCTCCCATGTCGTCGCT GAAGACACCCCCAAGGGCAAAGGCGCGCTGCTGTTCAAGCGACTGGTCGAGGAACGTCTGCCCGGCCAAGTGACCGTCGAGGTCTATCCCAACTCCACGC TGTACGGCGATGCCAATGAGCTGGAAGCCCTAAGCAACAATGATGTTCAACTATTGGCACCCTCGTTGGCCAAGTTCGAGAAGTACACCAAACAGGTGCA
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| Amino Acid Sequence |
>RND transporter
MKAVLLLAAIFTLSACAVGPDYRTPETAPAKIERANAEGFDRSRFESAWWRQFDDSTLDALVGEALSENRELRIAFARLRAARSIRDDAANDRFPTVTAG ASAEYGKAQQPGTSEERSNIERYDLGLDMAWELDLFGRIQRRIESSEAQSEAAEAELYQLQVSLIAELVDAYGQLRGAQLRERIARENLANQRESHQLTE QLREAGMGSELDVLRADARLAATEASLPQLQATQTRARNRIATLLGQRPEQLSVDLSPRKLPAIAKALPIGDPGELLRRRPDILSAERQLAAATANVGVA TADLFPRVSLSGFLGFIAGRGSQIGSSAAQAWGVAPSISWAAFDMGSVRARLRGAEADAEGALANYEQQVLLALEESENAFSDYARAQERLLALLRQSSA SRAAAQQAQIRYREGTVDFLVLLDAERERLTAEDAQALAEVDLYRGIVALYKALGGGWQLAAGQRLT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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