Pseudomonas stutzeri NT0128, UF78_RS14460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 50_124803_17458158, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTTGCTACGACCGCGCCTGGTCGGCTATGCCGTCGCCTTGGTGCTGATGGTTGGAACGTTCGTCTGGGCATTGGATGCGCGGCCAATGCTCTCGCTGGAC GTGACCAAGGACCGCACGTTGTATCGGGAAAACATGCAAGGCCAGATTGAGAACATGTACAGCCTCAAAGTTATCAACAAGACCCAACAACGCCGTGACT ACCTGATCACCCTCGGCGAAGGCCCTTTTGAGCTGCATGGCCCGCGCGAGGTCAGCCTGGCACCTGGGGAGATCGTTGATCTGCCGGTCAGCGTGGCGCT GGTCGACAATGAAGAAAGCACACACCGTGAGCTGCACTTCGCCGTTAGCGACGCCAGCGAGCCAGCAAGCCGGGTAACGGCGCCGAGCACCTTCATCGCG CCCAGGGTTCCGTAGAACGGCCATGACAGTTCCACACGGCCCAAGCTGCGATACTCGGCCACATCGTCAGCCAGCATCGCCACGGGTGAGTCAGGACAAG
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| DNA Sequence for Gene |
>UF78_RS14460
ATGAAGCGCTACGAGAAATTCGCCGACGAAATCGCCGAGCTGATCCGGACCGGGGTGCTGACGCCAGGGGAAAAGGTGCCCTCGGTGCGTCATGCCAGCC GTACCTGCGGTATCAGCCCTTCGACCGTATTCCAGGCTTACTATCTGCTCGAGGATCGCGGCCTGATCCAGGCCCGGGCACGCTCCGGCTATTTCGTTCG CGAGCACATCAAGCGCCCGCTGCACGAACCCGAAATCAGCCCGCGTCAGAGCGAAGCCACGGAGGTCGGCGTCAGCGAGCTAGTGTTCTCCGTACTGGCC TCGCTTCGCGACCCCGACACCGTGCCCTTCGGTTCGGCCTTTCCCAGCCCCGAGCTGTTCCCACTGCAACGTCTGGCGCGCTCCATGGCGCAGACCGTAC GCGAGATGCCGGCTCGCGAGGTGGTGGCGGAAATGACCAGCGGCAATTCCGATCTGCGTCGGCAGATCGCCCTGCGCTACATGGTCAGCGGGGTGATGCT GCCGATGGACGAACTGGTGATCACCACCGGGGCCATGGAGGCACTGAACCTCTGCCTGCAGGTCGTCACCGGCCCCGGCGATCTGGTCGCCATTGAGGCG CCGGCCTTTTATGCCACCTTGCAGGTACTGGAGCGGCTCAAGCTCAAAGCCGTGGAAATTCCGGTGCATCCTCGCGACGGCATCGATCTGGACGCGCTGG AAAGCAGCCTGACCAATCTGCCGATCAAGGCCTGCTGGTTCATGAGTAGCCTGCAAAATCCGCTCGGCGCGAGCATGGGCACGGAGAAAAAGCAGCGCCT CTATCAGCTGCTGCAGCATCATCAGGTGCCGTTGATCGAGGACGATGTCTACGCCGAGCTGTATTTCACCCGCGAGCCGCCGAAACCGGTGAAAAGCCAC GACCATGAAGGATTGGTGATGCATTGCGGCTCGTTTTCCAAGAGCCTGGCGCCGGGCTACCGGATCGGCTGGGTGGCAGGCGGCCGATACGCAGAGCAAA TCAGCCGGCTGAAACTGATGACCACCCTCTCGCCCTCGGTACCGGCGCAAGCGGCCATTGCCGACTACTTGCAGCACGGCGGCTATGACCGGCATCTGCG CAAGTTGCGCCATGCCCTGGAGCGCCAACAGGGGGAGATGCTCGCCTCCGCCGCACGACACTTTCCCGCCAGCACACGCGTTACCCGGCCCAGCGGTGGT TATTTTCTGTGGTTCGAATTTCCCGAGCAGGTCGACTCACTGCAACTGCTGCAGCTCGCGCTCGCCCAGGGCATCAGTCTGGCTCCCGGGCCGATCTTCT CAGCCACACAGCGCTTCAGGAACTGCGCACGACTGAACCATGGCCATCCCTGGGATGCACGCAGCGAGAAGGCCATGGAATTGCTAGGACGAATGATCAA GTCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAATGCCTCGACGGCAAATACCTTAATGCTAGATTTCAATCGTGCCTTGCAGGTACTGCACCGCTCGCCCGGCCACGAATACCCGCTCCCCTTCGATCCG GCAGTACAGCAGGCCACTGCGACGCGAGGCTTGCAACGCGACCAGCGACGATTTGCCCAGCCGCCCGGCCCAATAGGGTGCGAGGCCGGCATGGATCGAG CCCGTGACCGGATCTTCATCGCCACCGTTGGCCGGCCAGAAGTACCGGGAGACGAAATCTTGCTCACGCCCTGGCGCGGTGATCACCACATCCAACGGCG CGAGTGACTTGAGCGGGGCGAGATTGGGTGTCAATTGACGCACCTGGTCCTCATCCTCATATACCGCGAACCAGGCCTGTCCGTTTCGCAAGACCGCGTA CGGCGGTACGCCCAGCCCCTCGACCAAGGCAGCCGGTGGGCTATCGACGCGCTCAGGTTCGCGGTTAGGGAAGTTCATTTCCAGCCGGCCATCATCCAAC
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYEKFADEIAELIRTGVLTPGEKVPSVRHASRTCGISPSTVFQAYYLLEDRGLIQARARSGYFVREHIKRPLHEPEISPRQSEATEVGVSELVFSVLA SLRDPDTVPFGSAFPSPELFPLQRLARSMAQTVREMPAREVVAEMTSGNSDLRRQIALRYMVSGVMLPMDELVITTGAMEALNLCLQVVTGPGDLVAIEA PAFYATLQVLERLKLKAVEIPVHPRDGIDLDALESSLTNLPIKACWFMSSLQNPLGASMGTEKKQRLYQLLQHHQVPLIEDDVYAELYFTREPPKPVKSH DHEGLVMHCGSFSKSLAPGYRIGWVAGGRYAEQISRLKLMTTLSPSVPAQAAIADYLQHGGYDRHLRKLRHALERQQGEMLASAARHFPASTRVTRPSGG YFLWFEFPEQVDSLQLLQLALAQGISLAPGPIFSATQRFRNCARLNHGHPWDARSEKAMELLGRMIKSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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