Pseudomonas stutzeri NT0128, UF78_RS00620
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 31_51882_9430774, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TAAACCCTTCTTTGTATTCCACGAGGCTTACGACTATTTCGAGGCGGCTTACGGCCTCGAGCACACCGGTGTGTTCAGCGCCGGTGGCGAGGCCCAGCCC GGAGCGCGTCACGTGGCGGAGATGCGCCAGCGTCTCGAACAGGCAGGCCCCAGCTGCGTGTTCCACGAACCACCGGCCCGTCCGCGTCTGGCTAGCGCCC TGGTCCGCGGTCTGCCGGCAAAAGTGGCCGAGCTGGATGCCATGGGCCATGGTATCGATGCTAATGCTGACGGCTATGCGAGGTTGATCGAAAACCTCGG AACTTCGCTCGCCGAATGCGTGGAATCGCTCTAGCGCCTCGATGTGACGCCGATGCGCTTGGCTGCGTTGAGGCGAGTCCGCCATCGCCGCGCAGCTTCC GCACGTCGATGGAGTTGACTGGGATCAGGTGTTCTTTCCCGCTACCTGGCATAAGCTTCTTGCTTCGGTTTTTCATCATCGACACGAGGATGCGTAGCGC
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| DNA Sequence for Gene |
>UF78_RS00620
ATGGCGAAGACGGACGGGCCCATCGCGGCACAAAGCAAGACCACTTCCAGCATCGCCTTGCAGGCGGCCTCCGAAGATATCTGGGCGCAGAAGTACCGCC TGACCCGCAAGGATGGCAGCCCGGTCGACGACAGCGTCGATGCCACATGGCAGCGGGTGGCGCGGGCGTTGGCCGACGTTGAGCCGGCCGAGCAGCGTGA ACACTGGTACGAGCGCTTCCTTTGGGCGCTGCGCAACGGCGCGATTCCCGCCGGACGGATCATTTCCAACGCTGGCGCGCAGGACTACAAACCCGCCACC TCGACCATCAACTGCACCGTCTCCGGCACCATCAGCGATTCGATGGACGACATCCTCGGCAAGGTTCACGAGGCCGGACTGACGCTCAAGGCCGGTTGCG GCATCGGCTACGAGTTCAGCACGCTGCGCCCGCGCGGCTCATTCGTTTCCGGGGCCGGTGCACATACCAGCGGACCGTTGTCGTTCATGGATATCTTCGA CAAGATGTGCTTCACCGTCAGCTCCGCCGGCGGTCGGCGCGGCGCGCAGATGGGTACCTTCGATGTCGGCCATCCGGACGTGCGCGAATTCATCCGCGCC AAGCGTGAGGACGGTCGGCTGCGCCAGTTCAACCTGAGTCTGCTGATCACCGATGAGTTCATGCAGGCGGTAGACAGCGATGCCGACTGGCCGCTGATCT TCCCGCTGCACCTCAAGGAAAAGGCCGAGCTGGACCTCGAAGACTCAGAGCAGGTGGTCTGGCGCGAGTGGCCGAGCCACGACGGCTACGTCGTGCGCGA TGATGGTCTGGTGGCCTGCAAGATCTACGGGCGGGTCAAGGCGCGGCACCTGTGGGACATGATCATGGTGTCCACCTACGACTACGCCGAGCCGGGCTTC ATTCTCATCGACCGGGTCAACCAGCTGAACAACAACTGGTGGTGCGAAGCGATCCGCGCCACCAACCCCTGCGGCGAGCAACCGCTGCCGCCCTATGGCT CCTGCCTGCTGGGCTCGATCAACCTGACTCATTTCGTCATCGATCCGTTCGGCATCGATGCACGCTTCGACTGGGACAAGTACCGCGAAGTGGTGCGCCT GTTCACCCGCATGCTGGACAACGTGGTGGAGATCAATGGCCTGCCGCTGGAACAGCAGCGCCATGAGATCGAAAGCAAGCGTCGTCATGGTATGGGCTTC CTCGGCCTCGGCTCGGCCCTGACCCTGCTCAAGTTGCGCTACGGCAGTCCGGAAGCTTGCGTGTTCACCGAAGAAGTCGCGCGTGAAATGGCGTTGGTTG GTTGGGAACAGGCGCTGGAACTGTCGAAAGAGAAGGGCCCGGCGCCGCTGTTGACTGAGACCTTCGACGTGACCGCCGAGATGCTGCGCAAGCGCCCGGA AATGAAAAAGGACGGCTTCAAGGTCGGTGACCAGGTACCGGGCCGCGTCCTGCATGCGCGGTACTCGCGCTACATGCAGAAGATCGCCGAATACGCGCCC GAGCTGATCGAGGCACTGGCCGAGCAGGGCGCGCGCTTCACCCATCACAGTTCCATCGCGCCCACCGGTACCATCAGCCTGAGCTTGGCCAACAACGCCT CCAACGGTATCGAGCCGAGCTTCGCCCACCACTATTCACGCAACCTGATCCGCGCCGGTCGCAAGGCCAAGGAAAAGATCGAGGTGTTCAGCTACGAGCT GCTGGCCTACCGCACGCTGATCAATCCCAAGGCGCAGCCAGGCTCCGGTGATCCGGCGCAGCAGCTGCCCGACTACTTCATCACCGCCGACGACGTCACC CCGACGCAGCACGTCGATATTCAGGCCGCAGCGCAGAAATGGGTCGACTCGTCGATTTCCAAGACCGCCAACGTACCCACCGACTACCCCTTCGAGGCGT TCAAGGACATCTACCGCTATGCCTGGCGTCAGGGGCTCAAGGGCTGCACCACCTTTCGCTTCAATCCGGCCGCTTTTCAGGGGGTGCTGGTCAAGGAGGC CGATCTGGAGAAGACCCTGTACCGCTTCGTGCTCGAAGATGGCAGCGTGGTCGAGCTCAAGGGCAACGAGGAAGTCGAGTACGACGGCGAAGTGAACACC GCGGCCAACCTGTTCGATGCCTTGAAAGAAGGCTATTACGGTAAGTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCATTGATAGTCGGACGGCGCGCGCCGCCCGGATGGAGAATTCGCAATGACCGTCAAGATCACCCAGCGCATCAAGGGCTTCAAGGTTGTCGACGAAAC CCTCGAGCGCCCCGTTGCAACGCCAGACAGCAGTACCGGCACGCCCAGCAAGGCCACCGTGGTGGAAATGGACGAAAGTCTGCAACGCCCGGAAACGCTG GTTGGCATGACCTACAAGATCAAATCGCCGCTGTTCGAGCATGCGCTCTACGTCACCGTGAACGACGTCGTGCTCAACGCCGGCACGCCCCATGAGCAGC GCCGGCCGTTCGAGATTTTCATCAATTCGAAGAACATGGACCATTTCCAGTGGATCGTCGCGCTCACACGGATCATGTCCGCGGTGTTCCGCAAGGGCGG TGACTGCACTTTCCTGGTCGAGGAGCTGAAAGCCGTGTTCGACCCGCGCGGTGGCTACCTGAAGAAGGGCGGTGTCTACATGCCGTCGATCGTCGCCGAG
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| Amino Acid Sequence |
>NrdJa
MAKTDGPIAAQSKTTSSIALQAASEDIWAQKYRLTRKDGSPVDDSVDATWQRVARALADVEPAEQREHWYERFLWALRNGAIPAGRIISNAGAQDYKPAT STINCTVSGTISDSMDDILGKVHEAGLTLKAGCGIGYEFSTLRPRGSFVSGAGAHTSGPLSFMDIFDKMCFTVSSAGGRRGAQMGTFDVGHPDVREFIRA KREDGRLRQFNLSLLITDEFMQAVDSDADWPLIFPLHLKEKAELDLEDSEQVVWREWPSHDGYVVRDDGLVACKIYGRVKARHLWDMIMVSTYDYAEPGF ILIDRVNQLNNNWWCEAIRATNPCGEQPLPPYGSCLLGSINLTHFVIDPFGIDARFDWDKYREVVRLFTRMLDNVVEINGLPLEQQRHEIESKRRHGMGF LGLGSALTLLKLRYGSPEACVFTEEVAREMALVGWEQALELSKEKGPAPLLTETFDVTAEMLRKRPEMKKDGFKVGDQVPGRVLHARYSRYMQKIAEYAP ELIEALAEQGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYSRNLIRAGRKAKEKIEVFSYELLAYRTLINPKAQPGSGDPAQQLPDYFITADDVT PTQHVDIQAAAQKWVDSSISKTANVPTDYPFEAFKDIYRYAWRQGLKGCTTFRFNPAAFQGVLVKEADLEKTLYRFVLEDGSVVELKGNEEVEYDGEVNT AANLFDALKEGYYGKY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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