Pseudomonas stutzeri NT0128, UF78_RS16200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 272_381214_55044910_233____135, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCTGGTGTTTTTCCCCGGTTCAAGCATCGGCAATTTCACTCCACTGGAGGCTCGCAAGCTGCTCGGCCACCTGCACGAAATCCTTCCGCCCGGTGGTG GCGTGTTGATTGGCGTCGACCTGGTCAAGGACAGAGATGTGCTTGAGGCGGCCTATAACGACCGTGCTCACGTGACGGCGGCCTTCAACCTCAACGTGTT GCAGCGCATCCGCCAAGAGCTGGATAGCGATATCGACCCCTCACGCTTTACCCACCGGGCTTTCTTCAATGAACAGGATTCGCGCATCGAGATGCACCTG GTCAGCCGCGAGGCACAGGACGTGACCATCGAAGGCCAGCGCTTTCATTTCGATGCCGGCGAAAGCCTGCACACCGAGAACTCCTACAAGTACACCTTGG GATCTTTCGCCGACCTGGCCAATAGCGCTGGCTTCGACTGCAGTGGTCAATGGACCGATTCCCGCGACCTGTTCAGCGTGCACTATCTGCAATGTCGGCA
|
|
| DNA Sequence for Gene |
>UF78_RS16200
ATGAGGACAGCACGGCTTTTCCTGTCGATCGGTCTTGTGCTCGGAGCGTTGAATCCGAGCCCGGCAATGGCCGAGCCCGCTCCGTTACGCATCAAGGAGG TACAACGCTGCGGTGACCTCTTCGCCACCGATCTGCTGACCTTCTGCCTGCGCGGTACCGGGCTCGGCGACGGCGAGACCAGGTTGATGCTCGGCGGAAA ACCGGTCGAAAGCTCGCCGACCGGCGAAGGCAACCTGCGCCTGTCGCTGCGTAAGGCTGAGCACCAGAGCGGACCGCTCTGGCTCGAACAGGGCGAACGC CGGAGCAACCCGGTGTGGCTGTCACTGAACGGCAGCCATGTGCTGGCGGCGGGCCCTGACGAGGTGGCGAAGAACATGGACGGGCTGAATACCTATCTGA ACCTGATCAGCCTGATCATCGAAGAAAACCACGACGGCCTGGACGAAGCGCGCCGCCTGGCCAGCAAATATGGCGCCGAAGTGGTCGGCGCCATCGCACC GCTCAATACCTATCAGTTGCGCCTGCCGGTGAAAGACCTGACCGAGCGAGACGCCATGGTGCTGCGTCTGGGTAGTGAGGTGAGCGTGGATGCGGTGGTC GTCGAAGAATCCGGCCCTGAGGAGCCGGTGGAACAGGACCGTGGCAAGAAGCCCCGGAACAGTGAATGGGTCGCCAATCGGTTCCTCGACGCCGTGGATT ATTACCGGCATCGCCTGCCGGCCCAACAGAGCTCGGCCAAGATGCATCCGGTGCGCATCGGCGTCATCGAACGCAATCTCGACTTCGACTCGCCCGAATT CGCCCAGTACATCGGTGATTGCGAACCGCAGGCGCCGCGCACCTGCGTCTACGCCAGGGATGCTGAAGACCCCACCGAGCACGGCACCACGGTAACCGGC ATTCTCGCCGCGCGCAGTGAGGAACCCGGCGACAGCGGCTTTCTGAGCGCACTGGAACCGGCCAGCGCCGGCTTCGAGGTCATCGTCGAGCGCAACTCCG ATGCTGGCATCACCGCCAACGTCGCCGCCTCGGTCAATCTGGTCGAGGACGGTGTGCGAGTACTGAACTGGAGTTGGGGCATCCACCGCGTTGGCGCGCG GGACGTCGAGGGCGAAGAGGTCGATTCGCTGATTCGCTCCGGCATTGCCATGAGCGGCTACGAGGAATTGCTCGAGGAGTTCTTTCTCTGGCTGCGCCGC GAGCATCCCGATGTGCTGGTGGTGAACTCTGCGGGCAATGGCTCGGCCCATTCCGGCCAGGACGACTACCGGCTGCCCTCCTCGTTCATCACCGAGCAAT TGCTGGTCGTCGGGGGCCACCAGCGCAACGGCAAGCGTGACGTTCCGGTCACGCATCCCGAATACGTCACCAAACGGCCTTCGTCGAATGTCGACATGCG TGTCGACATCACCGCCTCGGCCTGCACCCGCGCTGCAACGCTGGAACCCGGCAAACGCGGCGACGTGCATTGCGGCACTTCATACGCCACGCCGATGGTG ACCGGGGTCGTTGCGGCGATGCTCTCGATCAATCCGCAGCTTGCACCTGATCAGCTGCGTGAGCTGCTGCGCCGCAGCGCACTGACCATCGGCCGCGACC ATGATTTCGAAGCGGCAGAGGCCGACGACCTGACCGCACCGATCCTGCCATCGGAGCGCAGCTATCAGCTGAACAATCAGGACATCGGCCGCTCGGCTCG GCTGGACATGCGCAAGGCGCTGGAGCTGACTTTCGACAGTCTGAATCAGGCGCGTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGCCTCGGTCAACTGGGCCATTCAGCCTCCCGGCTGCTGCGTTTACATGCCGAAGCACACTCCCAGAAGTGCCGCTCTTTCATCTAACGCGTTTTATTG CAGCGCCTACAAGTGCGTCGTTAACGCTTCGCTTGTTCTCTTATCTTGCTCCTCGCGAAACATCCTGTAATAAACAATCATCGCTACCTCCGCCTAACAG AACTAACAAACGAAACGGCACTTGTCAGCGCGAAATAATCGCACTTCCAGCAACTACAATTAAAAACACTTATAGATCAGCCATTTATGTACACATATAA CTAATAGCTGATTGCTATCAAATAATGTCACTATGCAATTAAATAATCAAAGATATGGTTATTGGCGACTTACCGGCGCCAAAATAATTTTACTATCCGT TGTTCGATCTATATAACGCCTATCCATACAAAGCGAGTCGCCGGCTCCGTCGTTTCGCTGCGTTGTGTATTAGGTGGCGTCGTCGGCAGTGCTTCGTTTG
|
|
| Amino Acid Sequence |
>peptidase S8
MRTARLFLSIGLVLGALNPSPAMAEPAPLRIKEVQRCGDLFATDLLTFCLRGTGLGDGETRLMLGGKPVESSPTGEGNLRLSLRKAEHQSGPLWLEQGER RSNPVWLSLNGSHVLAAGPDEVAKNMDGLNTYLNLISLIIEENHDGLDEARRLASKYGAEVVGAIAPLNTYQLRLPVKDLTERDAMVLRLGSEVSVDAVV VEESGPEEPVEQDRGKKPRNSEWVANRFLDAVDYYRHRLPAQQSSAKMHPVRIGVIERNLDFDSPEFAQYIGDCEPQAPRTCVYARDAEDPTEHGTTVTG ILAARSEEPGDSGFLSALEPASAGFEVIVERNSDAGITANVAASVNLVEDGVRVLNWSWGIHRVGARDVEGEEVDSLIRSGIAMSGYEELLEEFFLWLRR EHPDVLVVNSAGNGSAHSGQDDYRLPSSFITEQLLVVGGHQRNGKRDVPVTHPEYVTKRPSSNVDMRVDITASACTRAATLEPGKRGDVHCGTSYATPMV TGVVAAMLSINPQLAPDQLRELLRRSALTIGRDHDFEAAEADDLTAPILPSERSYQLNNQDIGRSARLDMRKALELTFDSLNQAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|