Strain | Pseudomonas stutzeri strain NT0128 272_381214_55044910_233____135, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCCGAGCCCTTTGAGAACGCCAAGCGCGGCGCCGGCGATCTTGCGCCATTGGCGAGCGTCGAGTTCGCCCTCTTTGCCAGTGCCGACCAGTAGTACGC GATCGGCTTTCAGGTTCGGCAGGCTGTGCAGCAAGAGGGTCTGACCCGGCTTGCCCTGCAGGTCGCCGCGCTTGAGCAAGGCGCTGATGGCGCCGCCGCT GACCTGATCCACGCTTTGCGCGGTTGAGCCGAGCTGTAGATTTTCACCGACTGGCAAGACCAGGGTGGCTGTTTTTGCCGCAGCTGCTTTGGTGTTTTTT ACAACAAATTCCATGGCGTCGAGTCCCCAAGACAAAGAGTCGGGTTTGCAGGATAATGCCGGGCTTATTTTCCGGTGGTTCGTTCACCGGGGCGTTGGTA CGTATTGCGTGATGTCCAACGTCCTGTTGCGGGCGGACCGGCTGCTTGGCGGCTAGTTTGAGCGTAGCCGCCGGAGCCTGACAACCCTGGAGTGTCCGGT
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DNA Sequence for Gene |
>UF78_RS15825
TTGATCGTCTTTCGTTACCTGTCCCGTGAGCTGCTGGTCACCCTGAGCGCGGTTAGCGCCGTGCTGCTGGTGATCATCATGAGTGGTCGCTTCATCAAAT ACCTGGCGCAAGCGGCGCAGGGGCTCCTCGATCCGGGGGTGCTGCTGATGATCATGGGGTTCCGCCTGCCAGGGTTTCTTCAATTGATCCTGCCGTTGGG GCTGTTTCTCGGCATCCTGTTGGCCTACGGTCGGCTCTATCTCGATAGCGAGATGACCGTTCTTTCCGCTACGGGCATGAGTCAGCGTCGCCTGCTGGCC TACAGTCTGGCACCGGCGGCGCTGGTTGCTGGCCTGGTCGGCTGGCTCAGCCTCGGGTTAGCACCGCAGGGTGTGGCCGAGGTGGATCGCATCCTCAATG AGCAGGACTCGTTGACCGAGTTCGATACGCTGGTTCCGGGGCGCTTTCAGACCCTGCGCGACGGCACTCGCGTGACCTATACCCGTGAATTGACCGCCGA TCGAACCGAGTTGGCCGGCGTTTTCATCTCCGAAACCAACCGTTCCAGCGCGACGGGCAAGCAGCGTGGACTGTCTGTGTTGGTCGCGGAGAGCGGTCGC CAGGAAATTCAGCCCGATGGAAGCCGTTACCTGATTCTGGAAAACGGCTATCGCTATGATGGCACTCCCGGGCAGGCCGACTACCGGGCGATCCAGTACG ACACTTACGGTGTGCTTTTGCCCAAGCCGAAAATCAGCGTTGAAGTGAGCGAGCGCGAGGCGATGCCTACCCGCGAATTGCTCGGCAGCGACAACATTCG GCTGCAGTCCGAGCTGCAATGGCGGCTGTCGTTGCCGTTACTGGTATTCATCGTCACGCTGCTGGCGGTGCCGTTGTCGAAGGTTAATCCGCGCCAGGGG CGTTTCCTCAAGTTGCTGCCTGCCATTCTCCTGTACATGGCTTACCTGACCTTGCTGATTGCTGCCCGTGGTTCGCTGGACAAGGGGCGTATCCCTCCGG CGCTGGGGCTCTGGTGGGTGCATGGAGTCTTTTTTGTTATAGGGATGCTGATGCTCTACTGGGAACCGTTGCGACTCGCGATCGACAAGCGTCGCGCCAT GGCGGGAGCTGCTCATGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTTGACCGCTACATCGGTAGTCATGTGCTGCTGGCCATTCTGACCGTGCTCGGCGTCATCGTCGGTCTGGCGTTGCTGTTCGCCTTCATCGATGAGTTG GGTGATGTGAAAGGTAGCTACGGCACGTTGGATGCGGCTGTTTACGTGCTGCTGACGACGCCCAAGCGGGCCTACGAAATGCTGCCGATGGCGGCGCTGA TCGGATGCCTCATCGGTCTTGGCACGCTTGCCAGTAGTAGCGAGCTGACCGTCATGCGGGCCGCCGGAGTGTCGCTCGGGCGCATCGTGCTGGCGGTGAT GAAGCCGATGCTGCTGCTGATGCTGATCGGCGTGCTGATTGGTGAGTACGTGGCGCCCTGGAGCGAAAATGTCGCCCAGGCCAGTCGCTCCTCGGCACAG GGTTCAGGTGAAGCGCAAAGTAGCAAGCATGGGCTCTGGCATCGTCAGGGCGATGAGTTCGTGCACATCAACGCGGTTCAGCCGGGCGGTCTGTTGCTCG
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Amino Acid Sequence |
>permease
MIVFRYLSRELLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGVLLMIMGFRLPGFLQLILPLGLFLGILLAYGRLYLDSEMTVLSATGMSQRRLLA YSLAPAALVAGLVGWLSLGLAPQGVAEVDRILNEQDSLTEFDTLVPGRFQTLRDGTRVTYTRELTADRTELAGVFISETNRSSATGKQRGLSVLVAESGR QEIQPDGSRYLILENGYRYDGTPGQADYRAIQYDTYGVLLPKPKISVEVSEREAMPTRELLGSDNIRLQSELQWRLSLPLLVFIVTLLAVPLSKVNPRQG RFLKLLPAILLYMAYLTLLIAARGSLDKGRIPPALGLWWVHGVFFVIGMLMLYWEPLRLAIDKRRAMAGAAHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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