Pseudomonas stutzeri NT0128, UF78_RS00425

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri strain NT0128 268_45237_9192573_176____243, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCATAGCCACGGCGTGATCCACGGCGATATCAAACCAAGCAACGTAATGCTTGCCGAGGACGGGTTGCGCTTGTTCGACTACGGCCTCGGCCAGCCACT CGAGGAGGTTCTCAAGAAGCTACCACGCCTCTCTCGTAATCGTTTTAAGGCCTGGACGACCCGCTACGCGGCTCCAGAACTGCTGGAAGGCGCCGAGCCT TCCTCAGTCAGCGACATCTACGCGCTTGCGTGCCTGCTATTCGAACTTGCGAGCGGCCAGCACCCGTTCCGCCGGCTGAGTGCCAAGCAGGCCAAAGCTA TGGCCCTGGAGAAAGAGCTGCGGTGCCCACCAAATCTGATGCATGGCTGGCCAGTACTGCGTTCGGCGCTGGCGTTCAATATCCCTGACCGCACGGCGAG CTTGACTCAACTACTGGAAATTTTCCGTCGCCCCGCACCTAGCCGCCTGCAGCGCTGGTTCGGGCGCCCCCATGGATGACATAGGAAACAAGGAAGCGCC
DNA Sequence for Gene
>UF78_RS00425
ATGTTCAACGCGGCTAACGACACCCACTTCAGCCTCACCATCGAAGGCGTCGAGCACGACCTACAGGTACTCGCTTTCACCGGTCGCGAGGCCATCAGCC AGCCCTACCGATTCGACCTGGAGCTTGTCGGCGAGCATCCCGATCTCGACCTGCAGAGCCTGCTGCACAAGCCAGCATTCCTGTCGCTCTCTCCGGCCGG CAATGGCATTCACGGATTGATTCATCGCGTCGCACAGGGCGAGTCCGGCAAGCGCCTAACCCGCTACCAAGTAACTATCGTTCCGCAACTGGCGTACCTC GCCCACCGTACCGATCAGCGCATCTTTCAGCACCTGGCCGTACCGCAAATCATCGCCCAGGTGCTTGAGGGTCACGGCATTCAGGCTGACGCCTATCGTT TTCAACTCGGTCCTGTGGTCTATCCCGAACGTGACTATTGCACGCAGTATGACGAGACGGACCTGCACTTCATCCAGCGCCTGTGCGAAGAGGAAGGTAT CCACTATCACTTCGAGCACAGCGAACGAGGCCACGTGCTGGTGTTTGGGGACGACCAGACGAGCTTTCCCAAACTCGGCCAACCGACTGCATACCTCCAG GACAGCGGGCTGGTCCCCGACGAGCCAGTGATCAAGCGCTTTGCCGTCCGCCTGGAGACCCGTACCAACCGCGTCAGCCGGCGCGACTACGACTTCGAGC AGCCGCGTCTGGTGATGGAAGCCGGCCACAAGGGCTCCGAACAGCAGAGCGCATCAGGATCTGACCTAGAAGATTACGACTACCCGGGGCGCTTCACCGA GCGCGCCCGCGGCAAGCATCTATCTCAGCGTGCCTTAGAACGCCACCGTTCCGATTATCGGCGGGCTGAAGGCCGAAGCGACCAGCCCACGCTGGTCAGC GGTCATCTGTTGGAAATTTCCGACCACCCTCGACGGGAATGGAACGACCTCTGGCTGCTGACTGAGGTGTTTCACGAAGGTAAACAGCCGCAGGTGTTGG AGGAGTCGATTGCCAATAACTCAAGTCAGCGCGGGCACGGGCGCGCCCGCACAACTCAACCGGAAGAAGGACTGAGTTCTACGGAAGATCGCTTCACTCA AGGCTATCGCAACCGCTTTTTCGCAACCCCATGGGATGTTCCGTTCCGGCCCGCTTTGGACTACCCAAAACCCCGCTTACTCGGCGCCCAGACCGCAGTC GTCACCGGCCCCGCCGGAGAGGAGATCCACTGCGATGAGTACGGTCGAATCAAGGCCCAATTTTTTTGGGACCGCGAAGGCCAAGCGGACGACAAGACCA GCTGCTGGCTACGCGTCGCCAACAGCTGGGCCGGAGACGGCTACGGCGGTATCGCCATCCCGCGCGTCGGCATGGAAGTACTGGTTACCTTTCTGGAGGC CGACCCCGATCAACCCTTGGTCACAGGCTGCCTCTACCACGCCGAACACCAGGTCCCCTACGACCTGCCGGCGAACAAGACCCGGAGCGTTTTCAAGACA CTGAGCTCACCGGGCGGTGGCGGCTACAACGAGCTGCGCATCGAGGACCGCAAAGGTGCCGAACAGATTTACATCCACGCCCAGCGCGACTGGGACGAAA ACGTCGAGCACGACCAGAAAATCCGCGTCGGAAACGAACGCCACGACAGTGTAGAAAAGAACAGTTACACCGAGCTGCACGCCGAAGAACACCTGATCGT CAGAACCGAGCGCAAGGTGGAAATCAAACCCGACGACCATCTCGCGGTCGGGCAGAACCAACATATCAAGCTCGGCACCGCCCAACTGACCAAAGCCGGC CGCGAGATACACCTCAAGTCCGGCCAGAAAATGGTCATCGAAGCCGGCATCGAACTCACCCTCCACGCTGGCGGCAGCTTCATCAGGCTCGACCCCGGCG GCATCACCGTCAGCGGTCCATTGGTCAAGATAAATGCCGGTGGCGCGCCGGGCAAAGGGACTGGGATAAAGATCAAGCCGCCGGTGCTGCCGGGGATGGC GGATCGCGACAAGGCGGGGAGTTTGTTGGAGCAGGCGCAGCTAGGTGAGGCAGGCAACTTGACCACCAAACGCAAGCGCTCGCTTAACTTTTCGGGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAAAAGGATAGGGCAAGCCGCCAGGCGTGCTCATAGGCAAGGAGCAATGTACGAACATGGCCGAAAACAAACCGATCAATTGGAGCTACCCGTTCCCCAG CAGGGACGCAACCAGCAATCCGCTGCAGCTACTTACCCTTATGGCGTCAGCCAAGGGAGGCTACTACCCGACCGGCGAGAATGGCCTATGGCATGGCGGC GTGCATTTCGACGACGGCACTGCAGCCGAGTTCGATCAATCGAGCGTGCGCTGCATCGCTGATGGAGAGGTGATCGCCTATCGCATCGACGAGCACTACC CCGTCAGCGAGTTTACGGACGAGATCCCGCTGATCAAACGCGCGCCGTTTTCGCCGGGGTTCGTTCTGGTCAAGCACAGCCTACAGGCACCACCACTACG CAATGCCGACGGCCGCATCGATGATCGGAGTATCCCTCCAAACCTGACCCTCTACAGCTTGTATATGCACTTGCTGGACTGGCCGGGCTACCAGGCGCAG
Amino Acid Sequence
>type IV secretion protein Rhs
MFNAANDTHFSLTIEGVEHDLQVLAFTGREAISQPYRFDLELVGEHPDLDLQSLLHKPAFLSLSPAGNGIHGLIHRVAQGESGKRLTRYQVTIVPQLAYL AHRTDQRIFQHLAVPQIIAQVLEGHGIQADAYRFQLGPVVYPERDYCTQYDETDLHFIQRLCEEEGIHYHFEHSERGHVLVFGDDQTSFPKLGQPTAYLQ DSGLVPDEPVIKRFAVRLETRTNRVSRRDYDFEQPRLVMEAGHKGSEQQSASGSDLEDYDYPGRFTERARGKHLSQRALERHRSDYRRAEGRSDQPTLVS GHLLEISDHPRREWNDLWLLTEVFHEGKQPQVLEESIANNSSQRGHGRARTTQPEEGLSSTEDRFTQGYRNRFFATPWDVPFRPALDYPKPRLLGAQTAV VTGPAGEEIHCDEYGRIKAQFFWDREGQADDKTSCWLRVANSWAGDGYGGIAIPRVGMEVLVTFLEADPDQPLVTGCLYHAEHQVPYDLPANKTRSVFKT LSSPGGGGYNELRIEDRKGAEQIYIHAQRDWDENVEHDQKIRVGNERHDSVEKNSYTELHAEEHLIVRTERKVEIKPDDHLAVGQNQHIKLGTAQLTKAG REIHLKSGQKMVIEAGIELTLHAGGSFIRLDPGGITVSGPLVKINAGGAPGKGTGIKIKPPVLPGMADRDKAGSLLEQAQLGEAGNLTTKRKRSLNFSG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site