Strain | Pseudomonas stutzeri strain NT0128 267_21770_3297673_166__244, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGCCGGCTGGCACCTGACGGCCGAGCAGTTGCGGCGGCATGCAGGGCAGGGCCGACCGATCCCGGCTGGGCGATGGCTGGCGGCGTCCTGTCACGATG CTGAAGAGCTGGCCATGGCAACGGAGTTGGGAGTAGATTTCGTCACGTTGTCACCGGTCCTGCCGACCCCGACGCACCCCGACGCATCTCCGCTGGGGTG GTCCCGGGTATCGGAACTGCTGCAGGGCTTCAACCAGCCTGCCTTCGTGCTCGGCGGAATGTCTCTGGCGCATCTGCCCGCGGCAAGCCAGGCGGGCGCG CAGGGCGTGGCGGCGATAAGGGCGCTATGGCCCGCTGAACCTGCATGATGATTGCCGGTCGATGGCACAGGGTTGCTCGTTACTTGAGCTTCGATAGAGA AAACTAATTTTCCCTATTCCCTTAATCAATTAACCGTATGTGACCAGCTGCGTTATCGTAGCCCCCGTTAAATTTCTGAACCCCCTGAAGGAGTTAGCAG
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DNA Sequence for Gene |
>UF78_RS16615
ATGTCTCTGATCAACACCCAAGTCCAGCCGTTCAAGGTCAACGCTTTCCACAACGGCAAGTTCATTGAAGTCACCGAGGAATCCCTCAAGGGCAAGTGGT CGGTACTGATCTTCATGCCAGCCGCCTTCACCTTCAACTGCCCGACCGAGATCGAAGACGCAGCCAACAACTACGCCGAGTTCCAGAAGGCTGGTGCCGA GGTGTACATCGTCACCACCGACACCCACTTCTCGCACAAGGTCTGGCACGAAACCTCGCCAGCGGTCGGCAAGGCCCAGTTCCCGCTGATCGGCGACCCG ACCCACCAGCTGACCAATGCTTTCGGCGTACACATCGCCGAAGAAGGCCTGGCTCTGCGTGGCACCTTCATCATCAACCCGGAAGGCCAGATCAAGACGC TGGAAATCCACTCCAACGAAATCGCGCGTGACGTCGGTGAAACTCTGCGCAAGCTGAAAGCTGCCCAGTACACCGCTGCCCATCCGGGTGAAGTTTGCCC GGCGAAGTGGAAAGAAGGCGAGAAGACTCTGGCTCCGTCGCTGGATCTGGTCGGCAAGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGGCCGGCGAGCGCTGCGCTTAGCCGCAGGCTCAGAGCCATTGCGGACCGATTATCGGTCCGAGACACCAAACGCCTGGGCGCGAACCGCCTGGGCGTT TTATTACCTGACATTCTTAAAGGGGATCGCTGCTCATGTTGGACTCCAATCTCAAAACCCAGTTGAAGACCTATCTGGAAAAGGTCACCCAGCCGTTCGA GATCGTCGCGTCCCTCGGTGACGGCGAGAAGTCCCAGGAAATGCTCGAGCTGCTGGAAGAGATCACCAGCCTGAGCGACAAGATCACCCTGCGTACTGAC GGCGATGACGTGCGTCGCCCCTCGTTCGCGCTCAACCGTATCGGCGGCAATATCAGCCTGCGCTTCGCTGGCATCCCGATGGGACATGAATTCACCTCCT TGGTCCTCGCCCTGCTGCAAGTCGGCGGTCATCCGTCCAAGACTGCGCCGGAGATCATCGAACAGATCAAGAACCTCGACGGCGAGTACCGTTTCGAAAC
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Amino Acid Sequence |
>alkyl hydroperoxide reductase subunit C
MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYAEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDP THQLTNAFGVHIAEEGLALRGTFIINPEGQIKTLEIHSNEIARDVGETLRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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