Pseudomonas stutzeri NT0128, UF78_RS21905

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri strain NT0128 262_768688_135338178_129____244, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGAATTTCCACAGATTGTCGGTCTGTTCGACGAGTTTCTGGCTGCAGCCGGGCTCATCCTGAAATGGCAGTTCACGGGATTTCACCTGCGCTTCGCTC AGGCACATGCGCACCCCGCCAGAGCCCAGCTCGACGCCTTGCGCCGCAAGCATGTCTTCCATCATTTTCTTTTGCTCAGGCGGCAAGCCTTTCATCTGCT CGAGCATTTCCGCCATGCCTGGCATCTGCGTGCCATCCACTTCGATGTTGTCACTGGAAAACTCCCAAAGCCCAGGAAGCATTTCCAGCGCCTGAACAGG GAGTGAGCCAAGCAGTAACGCAGCAGCGCAGAGGTGAATGATGGGTTTCATCTCGAGACTCCAAAGTGATGTCCGTAAAGCCTAGCCGAGTCAGAAAAAC CCGAGTGGTGTTGAGTCATGCGTGTCGACGCGCGAGGGGCATAGCTTTGTGTTTATGAGAAGCGTTAGCATTAACGCTTCTCAAGGCGAAGGGTACGACC
DNA Sequence for Gene
>UF78_RS21905
ATGGCGACCGAGGGTATGGTCAGACATGAGCTGGTGCATCGGCTGTATGTCGACCATCAAGGCTGGCTGAACGGCTGGTTGCGGCGTCAGCTCGGCTGCA GCCAGAAGGCCGCCGATCTGGCGCAGGACACCTTTGTTCGCGTATTGAGCAAAGACCATGGTCTGGAACCCATTCGCGAACCTCGCGCCTACCTGCACAC CATCGCCAAGGGGTTGCTGATCAATCACTGGCGACGCAAGCGGATCGAGCAGGCCTATCTGGACGCGCTCGCCTTGCAGCCGGAGGCGGTCATGCCGTCG CCGGAATCCCAGGCGCTGATCGTCGAAACGCTGATGCAGGTCGATACGATGCTGACGCGTCTACCTTACAAGGTGCGTCGCGCATTCCTGCTGTCGCAGT TGCACGGGTTGACCTATGCGGCCATCGCCGTCGAGCTCGATGTGTCCGAGCGAATGGTTAAGAAGTATATGGCGCAGGCCATGCTGCATTGCCTGATGCT GGCCGAGGAGGCGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTCGACTATCAGGTGCTGCAAGCGGCGGCGCAGTGGTTCGCGGTGCTGCAGTCCGATTCGGTCAGCGAGGCTGATCGCGAGGCCTGGCGCGCCTGGCT CTCGACGCCGGAACATGCCCGGGCCTGGCAGCGGGTGGAGCGGATCAGCGGATGTCTGGAGCCCTTGGCCGGCGATCCGTTCAGCCCCGCGGCGACGGCT TTATTGCGCTCGGGACAGCCAACTCGGCGACAGGCGCTGAAAACCCTGTCGATTCTTTGCGGAGGCGGCGCGCTGGCCCTGGCCACGGGCGCGGTGCCTT GGCGAAGCTGGGCGGCGGACCAGCGCACGGCTGTTGGAGAGGTGCGCAACTGGCGCCTGGATGATGGCTCGCGGCTGTGGCTGAATACCGACAGCGCGGT GGATGTCGTCTTCGAAGAGCGCTCCCGTCAGCTCTCGTTGTACCGCGGCGAATTGCTGATGCAGGCGGCCGCCGAGCCTCGTCCGCTGGTGCTGCAAACG
Amino Acid Sequence
>RNA polymerase sigma factor FecI
MATEGMVRHELVHRLYVDHQGWLNGWLRRQLGCSQKAADLAQDTFVRVLSKDHGLEPIREPRAYLHTIAKGLLINHWRRKRIEQAYLDALALQPEAVMPS PESQALIVETLMQVDTMLTRLPYKVRRAFLLSQLHGLTYAAIAVELDVSERMVKKYMAQAMLHCLMLAEEAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site