Pseudomonas stutzeri NT0128, UF78_RS17125
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 259_250415_42058266_86____176, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCATCAACTGTGTCTGTGGGAATTCCCGCATTTGCAGGAGGTACTCGATCGGCTCGCCGTCCCCGTCGATCACCGGGGCGTCGATGCTGCCGGTAATGGG CAGGACACGCAGATACAAGTCCGGTGCCATGCGTTGGTTCAGGCGCAGTTCTTCTTCGCAGAAATGCTTGCGATCCGCCAGGTTGGTGAAGTTGAGAAAG CCGAAATCCACCGGCTTTTTCATCTTATAGGCATAGGCTCCGGTGAGGATGACCCAGGAGATGTGGGTTTCGATGATCCTGAAACCGTCGACCGGGTGGG GATAGAGGGCCGGATTTTGCAACGCGGCGATCAATGCTTGGCTCACGGTCATTCCTTGCAGATTGTTGGGCGGGGCGTGTGAGCAATCGCGACGCGGATC ACACACTCGGAAAACGGTCCATTATGTCTTTACGCGCGGTGCCTGCAAACCGCCAAGAGGCCGTCTGCCGAGTAAATCAAAGTGCGTATAATGCGCCGCC
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| DNA Sequence for Gene |
>UF78_RS17125
ATGACTAAAGCACGCTCCTCTCGTTCCCGTTCCAAACGCCGTTCCGGTGGCGCCCGTCCCTGGCTGGGCTGGATGATCAAGCTCTCCATCGTGGGCCTGG TGGTATTAGCCGGCGTGGCCGTATACCTCGATGCCGTGGTGCAGGAGAAGTTTTCCGGCAAGCGCTGGACCATTCCCGCTACGGTTTATGCAAGGCCTCT CGAGCTCTTCGTTGGGCAGAAGCTCGCCAAGGAAGATTTCCTGACCGAACTCGACGCGTTGGGGTATCGCCGCGAAAAGGCTGTTAATGGTCCTGGAAGC ATGTCGGTGGCCGCCAACGCGGTGGAAATGCATACCCGCGGATTCCGGTTTTACGAAGGGGCCGAAGAGTCACAGCGTATTCGGGTGCGTTTTTCCGGCG ACTTCGTGGCCGGACTAACACGCAGCGACGGGGGAGCGCTTCCGGTGGCGCGGCTTGAGCCTGTCACCATCGGCGGGCTGTATCCTGCGCACAACGAGGA CCGAATTCTCATCAGGCTCGACCAGGCACCGCCTTACCTTGCTGAAACGCTGGTTGCCGTCGAGGATAGAGAATTTTTTGATCACTTCGGCGTGTCGCCT AAGGCCGTCGCACGGGCTGTCTGGGTCAATCTCACTGCCGGCGAAGTGCGCCAGGGTGGCAGTACGCTGACCCAGCAGTTGGTCAAAAATTTCTATTTGA CCAACGAGCGCAGCCTCAGCCGCAAAGCCACCGAGGCGATGATGGCAGTGCTACTGGAGCTGCATTACGACAAGAATGAGATTCTCGAGGCCTACCTCAA TGAGGTGTTTCTCGGTCAGGACGGCCGACGGTCCATTCATGGGTTTGGATTGGCCAGCCAGTATTTCTTCGGTCGTCCGCTCGCCGAATTGAAAGTGCAG CACATCGCGCTGCTGGTCGGCATGGTGAAGGGGCCGACCTACTACAACCCGCGACGTCATCCGGAGCGAGCCTTAGAGCGTCGGAATCTTGTGCTCGACC TATTGGAAGAACAGCAGGTTTTGACACCAGAAGAAGCTGCAGCGGCTCGGCAGACGCCACTTGGCGTCACGCAGCGGGGTAGCCTTGCCGACAGCTCCTA TCCGGCGTTCCTCGATCTGGTCAAACGCCAGCTGCGCGAGGATTACCGCGACGAGGATTTGACCGAGGAAGGATTGAGGGTGTTTACCAGCTTCGATCCG ATCCTCCAGCGCAAGGCCGAGCAGGCCATGACGGAAACATTGAAGCGTCTTGGCAAAGCGGCAGAGGGCGTCGAAGGAGCGATGCTGGTGACCAATCCGG AAACCGGAGAACTTCAGGCGATGCTGGGCAGTCGTCAGCCGGGCTTCGCCGGGTTCAATCGGGCGCTGGATGCGTCGCGACCCATCGGATCGCTGATCAA ACCGGCTATCTATCTCGCGGCGCTGGAAAAGCCTAGTCAGTACACCCTGACCACTCTGTTGGATGACGAACCGTTCTCGGTCAAGGGCGCCGACGGCCAA GTCTGGAAGCCTCAGAATTATGGGCGCACCGCTCACGGCACGGTTTATCTCTACCAGGCGCTGGCCAACTCCTACAATCTGTCCACCGCGCGCTTGGGGC TCGATCTCGGAGTCCCTCATGTGTTGAAAACACTTGAGCGATTGGGCGCTTCGCCGCAGTGGCCGGCTTATCCGTCGATGCTGCTGGGGGCCGGTGGTCT GCGACCGATCGAGGTCGCCGGCATGTACCAGACGCTCGCCAATGGCGGCTTCAATACGCCGCTGCGCGGTATTCGCAGCGTTGTGGCGGCTGACGGTGAG CCGCTCAGTCGCTATCCGTTCAAGATCGAGCAGCGTTTCGATGCCGGTGCGATCTATCTGACACAATACGCCATGCGACGCGTCATGCTCGAAGGTACAG GGCGCTCGGCCTACAATTACGTGCCGAAGTCGTTGGCGCTGGCAGGTAAGACGGGTACCACCAACGACTCACGTGATAGCTGGTTCGCCGGGTTCAGTCA GGACCTTTTGGCAGTGGTTTGGCTAGGTCGTGATGATAACGGCAAGACTTCGCTGACCGGCGCAACCGGGGCATTGCAGATCTGGGCGGATTTCATGCGT CGGGCTGATCCATTACCGCTGCAGATGCCGTTGCCCGAGAACGTCGAGCTGGCCTGGGTGGATGCGCAAACCGGGCAGGGTACGTTGGAAAATTGCCCTG ACGCCGTACAGATTCCCTATATCCGCGGCAGCGAGCCCGCGCCGGGGCCTGGTTGCGGTATTCGAGCCCCAGCTGAATCGGTCATGGATTGGGTTCGCGG TTGGTTGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGGTCCCAGCTTAATGGAATTTCAAGAGGTTCGAGTATTGAGCAAGCAATGGATGATGGTTGTGGCGGTCGCGGTACTGGTGCAGGGGTGCGCGACGGT TAAGCGAGGGGCGATACCCGTCGTCGATTCGGGTGCGCCGGTGTCGGAGGAGGTCTCGGCACGGCAGCCTTATCGCACTCCTGGTCCGTCTGTTTCCGCA GCGCAACCTACGCAAGATTCAAGCGTCATGGTCATGGTGCCGCAGCAGAATTCGGAGCCGTTGCAGGTCTTCGCGGCGCCGGATGCTGCATTCTCCAGAA GCACGGAGCCGGTACCTGGTGCGCCTGGGCAGTGGACCGCGCCGCAACCGGCCCCGACACCTGCACCAAGCCAGTCCATGCCCAGCGGCATCCCCTCGAA TAGCGGAACGCTGTCGGCTGACGAACGGCTTGATGGGCCGGTATTGGCATTGCTTACGACGGCTCAGCAGCAACAAGGCGGGGGTGACCTGAACGGTGCC
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| Amino Acid Sequence |
>penicillin-binding protein
MTKARSSRSRSKRRSGGARPWLGWMIKLSIVGLVVLAGVAVYLDAVVQEKFSGKRWTIPATVYARPLELFVGQKLAKEDFLTELDALGYRREKAVNGPGS MSVAANAVEMHTRGFRFYEGAEESQRIRVRFSGDFVAGLTRSDGGALPVARLEPVTIGGLYPAHNEDRILIRLDQAPPYLAETLVAVEDREFFDHFGVSP KAVARAVWVNLTAGEVRQGGSTLTQQLVKNFYLTNERSLSRKATEAMMAVLLELHYDKNEILEAYLNEVFLGQDGRRSIHGFGLASQYFFGRPLAELKVQ HIALLVGMVKGPTYYNPRRHPERALERRNLVLDLLEEQQVLTPEEAAAARQTPLGVTQRGSLADSSYPAFLDLVKRQLREDYRDEDLTEEGLRVFTSFDP ILQRKAEQAMTETLKRLGKAAEGVEGAMLVTNPETGELQAMLGSRQPGFAGFNRALDASRPIGSLIKPAIYLAALEKPSQYTLTTLLDDEPFSVKGADGQ VWKPQNYGRTAHGTVYLYQALANSYNLSTARLGLDLGVPHVLKTLERLGASPQWPAYPSMLLGAGGLRPIEVAGMYQTLANGGFNTPLRGIRSVVAADGE PLSRYPFKIEQRFDAGAIYLTQYAMRRVMLEGTGRSAYNYVPKSLALAGKTGTTNDSRDSWFAGFSQDLLAVVWLGRDDNGKTSLTGATGALQIWADFMR RADPLPLQMPLPENVELAWVDAQTGQGTLENCPDAVQIPYIRGSEPAPGPGCGIRAPAESVMDWVRGWLP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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