Pseudomonas stutzeri NT0128, UF78_RS12530
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 254_186727_24230247_39____57, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCTGCTGATCGCGGCATTGGCTGGATACGCCTTGCATCTATGGCGCCGGGTTTGGCGAAGAGAGCGGCAGCTGGCCGATATGCAAGCGCAGCAGCATGC CGCGCTTGCGGCGGATCTGCGTGTGCTTGCCGGCAGCCTGCTCGACGAGCAGGTACCGCTGATCGAAGGCGCGATCCGGATCAAGGTGCTATTGGATAAT TACGACTCGAATCTTGGCCAGGATCCGCGCTGCCAGGTTTTCCAAGTGCTGTTCGAGGCGACTGAAAAGGTGCCGACACACGCTGCCTGGAAGGCGCTGG ACAAAGCCGAACGGCGCCGCCACGAAGCCAACTTCAGTGCGCTCGAATTACAACACAAGGCTGAGGCTCGCCGGTCCGCCCGCTGGTTGCTCGACGAAGT GTTGCCGAAGAACCGCGAAGCTGCCTGAGCGCGACGGCATCGCGCATCCACACCCATCTATCCTTCTGTTCCGTAGTGCCCTGTCTGTAAGGAGCCGTCG
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| DNA Sequence for Gene |
>UF78_RS12530
ATGTCTTTGCGTCTGCCGTTCGTTCTGGTTCGCCTGACCTTGGGCGTTGCATTGGTAGCTGGCGGCCTCATTGGCTGTCAGTCTTATCTGGACAGCCGCT ACAGCGATAGCCTGCCACCCGCGCATGGCGTCCAGGCCATCACTGGTTTGGACAAGAGCGTAAGCATCAGGCGCAATACGTTGGGCATGCCCTTGATCGA GACGGCGACATTCCACGATGCGCTGTTCGGTCTCGGATACGTGCATGCGACGGACCGTCTGAGTCAGATGGTTAACTTGCGGCTCATGGCCGAGGGACGT TTGGCGGAGATGGCTGGGCCTGGTGTGCTGGAGATCGACCGTTTCATGCGGGCGGTGAATCTTCGGCAAAGCGCTACCGTGCTGTATCGAGAAAGCTCGC CGCGGATGAAGCGGTTTTTCGAGGTCTATGCTCGCGGCGTCAATGCCTATCTGTTCCGCCATCGCGAAAAGCTGCCAATGGATCTGGCTGCCGCCGACTA CACCCCGGAATACTGGAAGCCTGAAGATTCGGTGCTGATCTTCTGCCTGTTGAACTTCGGACTGGCGGTCAATCTGCAGGAAGAGATCGCGTCGTTGGTC ATGGCTCAGCAGGTAGGCAGCGATAAGGTCGCTTGGCTGCTACCGACCTATCCCGACGAGCCGCTACCCTTCGATGAAGCCGACAAGCTGAAGGGGTTGA AGCTAGGCGGCGAGATACCAGGGCTCGCCGCGCTCGACAGCGCGGCCTCCGGGGTTGCTTCGTTGAACATGTTGGGGGTCGCCGCTTCCAACAACTGGGC GATATCCGGCAGCAACACCCGCAGCGGCAAGCCGCTGATGGCCAACGACACACACTTGCCGCTGTCGATGCCCTCGTACTGGAATTTCGTGCAGATCCGC TCGCCGAAATTCCAGGCCGCCGGGGTAACGATCGCAGGCGTGCCTGCGGTGATCGCGGGCTTCAACGGCAAGCTGGGCTGGGGCATGACCATGGTCATGG GCGATACCCAAGACCTGTTTCTGGAACAGGTGCGCCGCGAAGGCGGGCGATTGCTGTACCTCGCCGATGGCCGATGGATCCCGGCGCGCGAGCGCCACGA GACCTTCTTCATCAAGGGTGGGAGACCGATCCGTGAAACGATCTACGAAACCCGCAACGGCCCGCTGCTGAACAGCGTACTCGGCGAGCGCAAGCACCCG TTGCAACCGCTGCAACTGAGCAGTGGCTACGGGTTGGCGCTGAAAACGACGCAGTTCGAGGCTGACCAGTCGCTGGATGCGTTTTTTGACCTGACCCGCG CGCAGTCGGTGGATCAGGCTTTCGAAGCAACCCGCGAGATCCGCGCGGCCGCGCTCAATATCGTGTTTGCCGACGAGCAGAGCACGGGCTGGCAAGTGAC CGGTCGCTACCCGAATCGCCGCGAAGGCCTGGGATTGTTGCCATCGCCGGGTTGGGATGGGCGTTACGACTGGGATGGCTTCGCCGATCCCATGTTGCAT CCCTATGACCAGGACCCGCCGCAAGGCTGGCTGGCGACGGCCAATCAGCGCACCGTGCCCAAGGGCTACGGTATGCAGCTGTCCAACTCCTGGTATTACC CGGAGCGTGCCGAGCGCGTGGCCGAGCTGCTTGCGCAGGGCAAGCAGGACAGCCGCAGCGTGATGGCGATGCAGTACGATCAGACAACAACCTTCGCCGC CAAGCTGCAGGCCATGTTTCAGGCGCCAGGGATGGCGGAGCCGCTGAAAGCCGCCATCGATGCGCTCGCCGAACCGGAGCGGGGCAGGGCGCGCGTAGCG CTCTCGCGATTGCTGAGCTTCGATGGCAAGCTCGCCGCGGACTCTGCCGATGCGGCCCTTTATGAAAGCTTTCTGATGGAATCGGCGCGACAGACGTTTC TGGACGAGCTGGGGCCGGAAAGCAGTGCTCCATGGAACGCGCTGGTGGAAACCGCAAACGCCTCATACTCCGCGCAGGCTGATCATCTGCTGGGCCGCGA TGACAGTCCGTTCTGGGATGACCGGAACACGCCACGCCGGGAAGACAAACCCGCAATCCTGGCGCGTTCACTCGCCGCCGCGTTCAGCCGCATGGAAGCC GCGCAGGGGGCTGATCGCGATGCCTGGCGTTGGGGAAAACTGCACACCTATACTTGGCGCACCGGCAGCACGCAGCTGGCACCTTACCTGCCGTCCAGCC AGCGCACCGGCATCAATGCGATCAGCGGCTATCTGGACCGCGGGCCATACGCGGCGGGCGGCGACCACAGCACCTTGAACGTATCGGCCTACCGCTGGGG CGATAACTTCGATACCTGGCTAATCCCGGCGATGCGCATCATCGTCGATTTCGGGCGCGACGAGCCGATGATCGGGCTCAACAGCTCCGGTCAATCCGGC AATCCGGCCAGCCCGCACTACGCCGACGGTATCGACGCCTGGTTGAAGGGCGGCTATATGAGCTTCCCGTTCAAGTCCGAGAATCTGGACAAGGTCTACG GCACCGAACGGTTGCTACTGACCCCGGCACGCCAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTCGCGGCGCCTAGCGTTACACCCGCAGCACTTCCACTACCGTGATGGACGCCGGGTCCGGGTAATGCCAGCGCACCTCGACATCCCATAGCCGCGTCC CGTAGCGGCGCTCCGGTGTCGGCGTTTGATAGGCCGGTCGCGGATCTTGCGCCAGACACTGTTCGATCAGTGCCTGCAGGGGTTCGCCGAGCCGAAGCGC TTCGCAACGGGCTTGTTCCAGGCTCGTCTCCGTCCAGCGCACGGGGATGAGTTCCGGGGCATCGTTGGCCAGGCCATTGTGCGCGTCGTCGACGGCATCG GCGTAAGGAACGTAAGGCTTGATATCCAGCACTGGCGTGCCATCGAGCAGGTCGATCCCCGACAGATGAAGGCGGCCGGGTTCGATCCGCTCGAGCCTGA CCACAGACTGGCCGATGCCGTTGGGGCGGTGCGTCGAGCGGGTCGCAAACACACCGACCATGCGGTTGCCGCCTAGGCGCGGCGGGCGGACCCGTAGACG
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| Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MSLRLPFVLVRLTLGVALVAGGLIGCQSYLDSRYSDSLPPAHGVQAITGLDKSVSIRRNTLGMPLIETATFHDALFGLGYVHATDRLSQMVNLRLMAEGR LAEMAGPGVLEIDRFMRAVNLRQSATVLYRESSPRMKRFFEVYARGVNAYLFRHREKLPMDLAAADYTPEYWKPEDSVLIFCLLNFGLAVNLQEEIASLV MAQQVGSDKVAWLLPTYPDEPLPFDEADKLKGLKLGGEIPGLAALDSAASGVASLNMLGVAASNNWAISGSNTRSGKPLMANDTHLPLSMPSYWNFVQIR SPKFQAAGVTIAGVPAVIAGFNGKLGWGMTMVMGDTQDLFLEQVRREGGRLLYLADGRWIPARERHETFFIKGGRPIRETIYETRNGPLLNSVLGERKHP LQPLQLSSGYGLALKTTQFEADQSLDAFFDLTRAQSVDQAFEATREIRAAALNIVFADEQSTGWQVTGRYPNRREGLGLLPSPGWDGRYDWDGFADPMLH PYDQDPPQGWLATANQRTVPKGYGMQLSNSWYYPERAERVAELLAQGKQDSRSVMAMQYDQTTTFAAKLQAMFQAPGMAEPLKAAIDALAEPERGRARVA LSRLLSFDGKLAADSADAALYESFLMESARQTFLDELGPESSAPWNALVETANASYSAQADHLLGRDDSPFWDDRNTPRREDKPAILARSLAAAFSRMEA AQGADRDAWRWGKLHTYTWRTGSTQLAPYLPSSQRTGINAISGYLDRGPYAAGGDHSTLNVSAYRWGDNFDTWLIPAMRIIVDFGRDEPMIGLNSSGQSG NPASPHYADGIDAWLKGGYMSFPFKSENLDKVYGTERLLLTPARQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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