Pseudomonas stutzeri NT0128, UF78_RS12460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 254_186727_24230247_39____57, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCAACTTCATCGTCAAGGCTCATTTCTGATACGAACGGCCACGCGCTTCGCCCCTCGGCGTTCGGTTGGAAGTCGTATCTGACATAGCCTGAGACCAT GGCGGTCGTTATCGGATGATGACTGCCATTGCTACGAGGCGGCACAAGCAGTTTCGGCCGGTCCGTTGCGAGCCGGCCTTGCCGACAGCGGAGACAGATG CGCTACAAAAGAGGGCAAGCCTCGCCCCATGATCCCATTTTGGTGCACGAATGCGGGTCGGACGCCCGTGCAGCCGGCAGACAAGGGAGTCAAAAGCGAC GTGCCAGAGCCCTTCGGGTACACAACCCGAATCGCACCGGTAAACCTAAGCGGCTGGTCAGTTTCTTGCAGCCCCGACTCCTGAACGACTGCGACAAATC TGCTCGATCTGCTGCTGTCGCGAGGAAAATCAGCCGATGCCGCCTACGCTAGCATTAGGAAGCGCATCGGGCTGATACCGCCACCACAGGGAACGGACTT
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| DNA Sequence for Gene |
>UF78_RS12460
ATGAATACTTTCGACGCAACGCTCACCCAGCCGTCTGTTGCCAGCAAACGCACCGGCCGGATTCGCCAGAAAAACGAAGAACTGATTCTCTCGGCGGCTG CGGAAGAATTCGCCCGCTATGGCTACAAGGGCACGAGCATGAACGCGATCGCTTTGCGTGCAGCGCTGCCCAAGGCCAATCTGCACTACTACTTCAACAA CAAGCTGGGACTTTATGTCGAGGTGATGCGGCATATCCTCGAGCTTTGGGACAACGCTTTCGATAACCTCACCGTCGAGGATGATCCGGCCACCGCGCTG GCGCACTACATCCGCGCCAAGATGGAGTTTTCGCGTAGACAGCCTCAGGCCTCGAAAATCTTCGCCATGGAGGTCATCAGCGGCTGTGAATGCCTGTCGG AGCATTTCAACGAAGACTACCGCGAGTGGTTCCGCGGCCGCGCTGCGGTGTTCCAGGCCTGGAGCGACGCGGGCAAAATGGACCCGGTCGACCCCATGCA TCTGATCTTCCTGATCTGGAGCAGCACCCAGCATTATGCGGACTTCTCCGACCAGATCCGCCGCATCACCGGCCAGCGCCGGGTGACCAAGGATGATTTC GAGCGCGGCACGGACACTCTGATCCGGGTCATCCTCAAAGGTTGTGGCCTGACACCGCCAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGTTGCCGCGCAGTCCCGCCGTTGCAGGCTAAGCCGCTATGTCGCAATGACAGCCGTTCGCCGAGGCCGGCCTCCCAACGTCTGAATGATCGGCCATGGG CCGCAAGCGAAAGCGACTGGTCCGTACCAAGGCGTCCGATAGCGCACACACCAGCATCAGGCAAGCGCCCGGCAGGATCGACATAACGCAGCGAACGCCC TCCGCGACAAGATTCATTCGACGGCGCCACCGACGCCGGCACCTAATGAACCGCGGAGGACACATGTCGAACATCAACGGAAAAATCGTACTCATCACCG GCGCCAGCAGTGGTATCGGCGAAGCAACGGCGCGCCTGTTGGCCGCGCAGGGCGCCAGCGTCGTGCTGGGTGCTCGCCGCCTGGATCGCCTGGAACGGCT TGTAGCCGACATCAACGAGGCTGGCGGCGTGGCCGCATGCAAGGCGCTGGACGTCACCCGGCGCGAAGATGTGCAGACCTTCGTCGACTTCGCCGAACAG
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| Amino Acid Sequence |
>TetR family transcriptional regulator
MNTFDATLTQPSVASKRTGRIRQKNEELILSAAAEEFARYGYKGTSMNAIALRAALPKANLHYYFNNKLGLYVEVMRHILELWDNAFDNLTVEDDPATAL AHYIRAKMEFSRRQPQASKIFAMEVISGCECLSEHFNEDYREWFRGRAAVFQAWSDAGKMDPVDPMHLIFLIWSSTQHYADFSDQIRRITGQRRVTKDDF ERGTDTLIRVILKGCGLTPPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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