Pseudomonas stutzeri NT0128, UF78_RS03435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 252_156340_25674807_32__152__146, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGATGCCGGCGCCGGTGTCATGCGCCGCACCGAAGACGCCATAAAACAATACGACCTGAACGTCCGACTGATGCCCAGCTCCGGGCCAGCGATGACCACC GCCCTGACCCGCGCGGAAAAAGCGCAGAAGCCGATCGTAGTTACCGGCTGGATCCCGCACTGGATGTTCGCCAAGTGGAAGCTGCGCTTCCTGGAAGATC CGAAGAAGGTCTTCGGTGACGACGAGCACGTCGATACGGTCGCCAACCCAGCGCTCGCCAGCAAGGCTCCCGAGGCCGAAGCCTTCCTGAAGAAGTTCAA CTGGGGTCCTGAAGAAGTCGGTGAAGTGATGCTGGCGATACGTGATGGCGCCAAGCCGGACGCTGCCGCCCGTGAGTGGGTGAAGAACCACCCGGAACGC GTCGCCAGCTGGCTCGAATAATCGGATCTCGCAATCCCCCTATACCCAACCCCGACCGGCGCACTGAACGAGCGCCGCTCGAAGCAATGGAGTCGTGTGC
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| DNA Sequence for Gene |
>UF78_RS03435
ATGCACGCAATCAAATGGACCACCCTGGCGCTGGCCGTCACCACCGCGGTCAGCCAGCTGGCCGTAGCCAGCGAACAGTCGGAAGCCACCGGCTTCGTCG AAGGCAGTGACCTGACGCTGCTGAACAAGAACTACTACTTCGCCCGCGATAACCATGCGCCTGGCGCCGCCCAGAGCCGCCGGGAAGAATGGGCCCACGG CCTGCTACTCTCCTATCAATCCGGCTTCACCCAGGGCACCGTCGGCTTCGGCGTCGACCTTCATGCCGGTGGTGCGATCAAGCTCGACAGCGGTCGAGGC ACCAGCGGCACTGGCCTGCTGCCAGTGGACAGCGACGGCCGTGCCGCCGACGACTTCGGCTTCGCTGGCGGCGCGGTCAAGGTACGTGTTTCCAACACGA CCCTGAAGTATGGCGACCTGACGCCCACCGCCCCGGTCTTCTCCCCAGGCACCGGGCGCATCTTCGCCAGCACCGCCACTGGCTTCCAGCTGACGTCCAA CGAGCTCGATCAGTTGACCGTCGACGCGGGCTATTTCACCTCGATTCGCGATCGCAACCGCTCGCTCAACCACGACGGCGAGATCACCCTGGTCTATGCC GGCGCCATCGACTCGGAAACCGTCAGTTATCTGGGCGGCACGTACCAGCTGACCGACAGCCTCAGCGCGACCCTCTACGGTTCCAAGTACGAGGACGTCT GGAGCCAGTACTACGGCAACCTGAACTACGCGCTGCCGCTCTCCGAAGGTCAGGCACTGTCGTTCGACTTCAACGTCTATGACACCCGTGACGAAGGATC CGCCCTGGCGGGGGACATCAACACCACAGCCTGGTCGCTGGCCGCCGGCTATTCGATCGGCGCGCATAGCTTCACCCTCGCCCATCAGCAGGTGAACGGC AACGCGCCCATGGATTACATCAGCATGGACGGCACCAACGCCGGCGACTCCATCTATCTGGCCAACTCTTCGCAGTGGTCGGACTTCAACGCGCCCGGCG AGAAGTCGGTACAGGCCCGCTACGATCTCAACATGGCGACCTACGGCGTGCCGGGTCTGAGCCTGATGGCCAGGTACATCAAGGGAGACATTGATGGCGC GAGCGTCGATCCCGATGGCGCCTACGCTTACTACGCCGGAGCCGCCGGCAAGGGCAAGGAATGGGAGCGCGACCTCGAAGCCAAGTACGTGGTCCAGGAC GGCGACCTCAAAGACCTCTCCTTGCGTGTGCGTTACGCCACCGCGCGCGGCTTCGCCGGCGACATCGACGAACTGCGCGTGATCACCGAGTACCCACTGG ACATCCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGCACCCGTACGGGCGCTCACGCGCCCGCACCTTACCCCCGAACGCCGTCGTGGCAGTGCCCGGCGGCCTTCGATTGGGGCGCAGGCAACACTGCCAT CGGGAAAACCGGCTAGCTGTCCCAACCCGCCTTTGGGCTCGTTCACATCTGCGTCTGCGACGCACGACATAGTCATATCCATTCCCGACAGCCCTTTGTT TTTTTATTGATCGATCAATCAATAAAAACTAGGGTGTACAGCATTCATCATCCTCCCGGAGCCTCCAATGCCCAAGGTTGGAATGCAGCCCATCCGACGC AAACAGCTGATCCATGCCACCCTCGCGGCCGTGGACCAGGTCGGTATGAGTGACGCCAGCATCGCCATGATTGCGCGACTGGCGGGCGTCTCGAACGGCA TCATCAGTCATTATTTCCAGGATAAGAACGGCCTGCTCGAAGCCACCATGCGGCACCTCATGAAGGCGCTGAATCAGGCCGTCCGTATACGCCGCGAGGC
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| Amino Acid Sequence |
>porin
MHAIKWTTLALAVTTAVSQLAVASEQSEATGFVEGSDLTLLNKNYYFARDNHAPGAAQSRREEWAHGLLLSYQSGFTQGTVGFGVDLHAGGAIKLDSGRG TSGTGLLPVDSDGRAADDFGFAGGAVKVRVSNTTLKYGDLTPTAPVFSPGTGRIFASTATGFQLTSNELDQLTVDAGYFTSIRDRNRSLNHDGEITLVYA GAIDSETVSYLGGTYQLTDSLSATLYGSKYEDVWSQYYGNLNYALPLSEGQALSFDFNVYDTRDEGSALAGDINTTAWSLAAGYSIGAHSFTLAHQQVNG NAPMDYISMDGTNAGDSIYLANSSQWSDFNAPGEKSVQARYDLNMATYGVPGLSLMARYIKGDIDGASVDPDGAYAYYAGAAGKGKEWERDLEAKYVVQD GDLKDLSLRVRYATARGFAGDIDELRVITEYPLDIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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