Pseudomonas stutzeri NT0128, UF78_RS08240
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 251_395628_52534932_28____91, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCACAACGCCAGGCGCTGGAATTGATGCCGGACGGCATTGGTCTGTTCGCGCTGGACGAAGATGTAGCCGCACGCGGCCTCGAAGATCTGCCCGAACGC TTGCAGCAAGTCGACTATACGGGCTTCGTCGAGCTGTGCTGTCGATACGCACGGACGAACGCCTGGCTATGAGTGGGTTGAATGTCAACGGCGTGGGCAT TGCCGTGGACCAGGATGGCTTCCTGGTCAATCTCGAGGATTGGAGCGAACCGGTCGCCACGGCGCTGGCCGAGGCTGAAGGCCTCAGTCTTGAAACCGAA CACTGGGAAATTCTGCACCTGCTCCGCGAGTTCTACCGTGAGTTTCAGCTAGCCCCGGCAACGCGCCCATTGATCAAGTACACCGCGCTGAAGCTCGGCC CTGAAAAGGGCAACAGCATGCACCTGAACCGTCTATTCAAAGGCACCCCCGCCAAACTCGCCGCAAAACTGGCGGGATTGCCGAAACCGAGCAATTGCAT
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| DNA Sequence for Gene |
>UF78_RS08240
ATGAGCCTCGTCACCCCGCCTGAACACCCCTTCGCCGTCTTCGTCCGGATCCTGGGCAAAGGCAAGCGCGGCGCCCGCGATCTCACCCGAGAAGAAGCGC GCGAAGCCATGGGCATGCTGCTCGATGGGAAGGTCGAGGACACGCAGCTCGGTGCTTTCTTGATGCTGCTGCGGCACAAGGAAGAAAGCGCCGAAGAGCT TGCCGGCTTCACCGAGGCCGTGCGCGACCGGCTGCACGCGCCTGCCATCGCCGTCGATCTCGACTGGCCGACCTATGCCGGCAAGAAACGTCATTTGCCC TGGTACCTGCTCGCAGCCAAGTGCCTGGCGCACAACGGCATTCGCATCCTCATGCACGGTGGTGGCGCTCATACGGCTGGCCGACTGTATAGCGAGCAGC AACTCGATCTGCTCGGAATCACCCGCTGCGAAGACTGGAACAGCGTCGCCGTCGCTCTGGGCCGTGCCAACCTCGCGTTCGCGCCGCTCGGGGCCTGGAT GCCGGGCCTGCAGCGGATGATCGATCAACGCAATATCCTAGGCCTGCGCTCGCCCATCCACTCGCTGGCGCGCATCCTCAATCCGCTCGGTGCCCGTTGC GGCCTGCAGAGTATTTTCCACCCCGGTTACCAGGGAAATCACCGCGAAGCCAGCCGTTTACTGGGTGACACGGCTATCGTTATCAAGGGTGAAGGCGGCG AGATCGAGATCAACCCGGACGGCGTGGCGCACCTGTACGGCACTCAGGCAGGAGAGTCCTGGGACGAGGATTGGCCGGCGCTTTCGCCACAACGTCACGT CAAACCGGCGCAACTCGATCCGCAGCATTTGCTCGCCGTCTGGCGGGGCGCCGCCGAAGATGCCTATGGCGAACTGGCGGTGGTGGCGACGATGGCCCTG GCGTTGCGCGGGCTCGGCCAATCGCGCGAGAGCGCATTTATCCAGGCGCGACAGTACTGGGAGCAACGCAACCTATCGGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGATGCGTATGGCCGGGGATTGTGACCCATCCATCGAACTATCCTCCATAGACTGACCCCTAATCTGAAAGTCTGAGGAGGCAGAACATGGGGCTCTTG GTCGATGGGCAGTGGCAGGACCGTTGGTACGAAAACAGCCGTGATGGCGAATTCCAGCGAGAACAGGCGCAACGACGCGACTGGGTGACTGCGGACGGCT CGCCCGGCCCAACGGGTCAGCCTGCAGTAAAGGCTGAAGCCGGGCGCTATCACCTCTATGTTTCTCTCGCCTGCCCCTGGGCACATCGCACCCTGATCTA TCGCAAACTCAAGCAGCTCGATCAGTTGATCGATGTTTCTGTCGTCAGCTGGCTGATGGCCGAGCATGGCTGGACCTTCGACAGACACACCGGCTCGACC GGTGACACGTTGGATGGCTTTCAGTACCTGCATCAGCGCTACACGCGCGATGACGATAACTACACCGGCCGCGTCACCGTACCGGTGCTCTGGGACCGCC
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| Amino Acid Sequence |
>hypothetical protein
MSLVTPPEHPFAVFVRILGKGKRGARDLTREEAREAMGMLLDGKVEDTQLGAFLMLLRHKEESAEELAGFTEAVRDRLHAPAIAVDLDWPTYAGKKRHLP WYLLAAKCLAHNGIRILMHGGGAHTAGRLYSEQQLDLLGITRCEDWNSVAVALGRANLAFAPLGAWMPGLQRMIDQRNILGLRSPIHSLARILNPLGARC GLQSIFHPGYQGNHREASRLLGDTAIVIKGEGGEIEINPDGVAHLYGTQAGESWDEDWPALSPQRHVKPAQLDPQHLLAVWRGAAEDAYGELAVVATMAL ALRGLGQSRESAFIQARQYWEQRNLSV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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