Pseudomonas stutzeri NT0128, UF78_RS08005
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 251_395628_52534932_28____91, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCGCATTTGGGCATGTCCGCGGCCCGCCGATAGGCCTGTACCTCATCCAGATGCAACGAACCCTGTACCGCGCTGTTCACGTGCAACCCGTTCTGCCT GACCGCCTCGTATTCGCTGCGCAGCAGAAAGTGCACGTCGTAGCCGGCCCGGGCGAGCATCAGTCCATAGAAACCACCGATGGCGCCAGTGCCAATAATT CCAATTCGGGGATGAGGTGCGGTCATGCAGAACTCCAGCTACAGGTCAGTACGACGCCAACAATGGCGCGCTTGAAATCGCAACCTTAGCAGCGTCCCGG GGCAGCGCCCAGCCGTCACTCACGGTAGCCCTTCGGTCGCATGCCGGTATAGGGCGGACCCAGGCGGCAGTCCGACTTCAAGGTCATTGTCGGAGCGCCT CAATACGCGATAAGGTTCCGCTTCCCCGCTGCGCCCTAAAGCCCTGCTCCGCCGCATCGGGATTGGCTGGCGGACGGCATCCGTGACTGATGAGAACACG
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| DNA Sequence for Gene |
>UF78_RS08005
ATGGCTGATTTACCGATCGATGACCTTAACGTTTCCTCCAACGAGACACTTATCACGCCGGAGCAGTTGAAGCGTGAAATACCGCTGACCGCTTCCGCGC TGAAGACCGTCTCCGAAGGACGCCAGGTGGTACGCAACATTCTCGACGGCAAGGATCATCGCCTGTTCGTGGTGATAGGCCCCTGCTCGATTCATGATCT CAAGGCCGCGCATGAATATGCCGAGCGCCTCAAGGTGCTGGCCGACAAGGTGTCCGACAGCCTTTTTCTGGTCATGCGGGTGTACTTCGAGAAACCTCGC ACCACCGTAGGTTGGAAAGGCCTGATCAACGACCCCTATATGGACGACTCGTTCAAGATCCAGGATGGCCTGCACATCGGCCGCCAGTTGCTGCTCGATC TCGCCGAAATGGGTCTGCCCACCGCCACCGAAGCACTGGACCCAATCTCTCCGCAGTACCTGCAGGACCTGATCAGCTGGTCGGCCATCGGTGCGCGCAC TACTGAGTCCCAGACACACCGTGAGATGGCCTCAGGCCTGTCCTCGGCGGTGGGTTTCAAAAATGGCACCGATGGCAGCCTGACCGTCGCGATCAATGCG CTGCAATCGGTATCCAGCCCGCATCGTTTCCTTGGCATCAATCAGTCCGGCGGGGTCTCCATCGTCACCACCAAGGGCAATACCTACGGTCACGTCGTGT TGCGCGGCGGCAACGGCAAGCCCAACTACGATTCGGTCAGCGTGGCCGTGTGCGAACAGGAACTGAAAAAGGCTGGCATCACCCCTAACATCATGGTCGA TTGCAGCCACGCGAACTCCAACAAGGATCCGGCATTACAACCGCTAGTCATGGACAACGTGGCTAACCAGATCCTCGAGGGCAACAACTCGATCGTCGGG TTGATGGTAGAAAGTCACCTCGGCTGGGGCAGTCAGCCAATTCCCAAGGATCTGGCTGACCTGAAATATGGTGTGTCCATTACCGATGCCTGTATCGACT GGGACGCTACCGAAAAGGCTATCCTCGGCATGCATACGAAACTGAAGAATGTACTGCCGAAGCGCGCTCGCGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGCTCACGGCGACTTGTAGCAAAAGAAACGCCGCTTGCCGGCGTTTTTTTATTCGCTGTCGATACTGTTCGTCGAACTGCCCTGCCGCTCTATGTACCA CTCCACATACGAACAGGACGGAATCACGGTGTAGCCCTCGCGCGCCGCGTAATCGAGCGCATGCTGAGCCAATACAGCCGCAACGCCGCGACCACGAAGC GCATCTGGCACGAAGGTCCGGTAGATATCCAGCGTCTGTTTACCTAAATCGACATAAGCAAGATAGGCGCGATAGCCATCCACGGTCGTCTCGAACTGGC GACCCGTTCGATCATGATGGATGGTTAGCTTCTCGGTCATCTCGCCTCCTCTGCAGGCTTGCCTGCCTATCGACTTGGAGCTGTGTGCGAGGCCGCACAT TCCCCATTCTTGTTGTTAGCTGGATGACGCATGCTACCGCCATGTAAGACTTGGCTTCAATTGATAAGTTGGCAGTGCTTCATGGCTGCGCTGAGCGATA
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| Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPIDDLNVSSNETLITPEQLKREIPLTASALKTVSEGRQVVRNILDGKDHRLFVVIGPCSIHDLKAAHEYAERLKVLADKVSDSLFLVMRVYFEKPR TTVGWKGLINDPYMDDSFKIQDGLHIGRQLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGSLTVAINA LQSVSSPHRFLGINQSGGVSIVTTKGNTYGHVVLRGGNGKPNYDSVSVAVCEQELKKAGITPNIMVDCSHANSNKDPALQPLVMDNVANQILEGNNSIVG LMVESHLGWGSQPIPKDLADLKYGVSITDACIDWDATEKAILGMHTKLKNVLPKRARG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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