Pseudomonas stutzeri NT0128, UF78_RS09265
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 250_340054_43730908_28____227, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGCACCGCCCGCGCGCATCTTCTCGGCGAGCGTGCCCTGAGGCGTCAGCTCGACTTCCAGCTCACCATTGAGCAGCTGCTTTTCGAACAAGGCGTTCT CGCCGACATAAGAGGCGATCATCTTGCGGATCTGCCGGTCTTCCAGCAGCACGCCGAGGCCGAAACCATCGACACCGCAATTATTGGAGACCACTGTCAG GTCGCGAGTGCCTTTGCGCTTGATCTCGGCGATCAGGTTTTCTGGAATACCGCACAGGCCGAAACCGCCGGCCAGTACGGTCATGCCGTCCTGTAGACCG TCGAGGGCTTCGGCGTAGGAATTCACGCGCTTGTCGAAACCAGCCATAAACCATTCCTTCTTGTTGTTGGAGGACGTGAGAGTCGTTGCCGTCGAGTGTT CCTGCAGAGATGTGATTTGTTAAGTTGATTTTTAAGCGTTATTAATTGGAAAAACAGAATAATCTACGGCGTTGGTACGTCTATTCGCTCGGACACTTCC
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| DNA Sequence for Gene |
>UF78_RS09265
ATGACCGTCAAACAATTACGCGCCTTTCTATCGGTGGCTCACACGCTTAGCTTCGCCCAGGCTTGCGAGCGCCTGCATCTCTCGCAATCGGCTCTGAGCC TGACCATCAAGGCGTTGGAGGATGGGCTCGGTGGCCGCTTGTTCAGCCGAACCACGAGGGCCGTCAGCCTCACGCCGGAGGGCGAAGCATTGTTGCCTCT AGCGCGACGGCTACTGGCCGACTGGGACAACGCCGAGGATGAGTTGCGCCAGCGCTTCACCTTGAAACAGGGCAGGGTGGCGCTGGCCTCGATGCCTTCG TTTGCCGGTAACCTGCTGCCAGCGGTGCTACGAACCTTTAGCGATCAATACCCCTCGATCAGCGTTACGGTGCATGACGTGATCAACGAACAGGTAATGG AAATGGTCCGCGATCGTCAGGTGGAGCTGGGCATCGCGTTCGAGCCTGAGCCGAGCGCACCTTTGACCTTCACGTCGCTATACACCGATCGATTCGTTGC CGTCGTGCCGGCGGAATCGTCGCTCGCGTCTCAGCCCGAGATCGCCTGGGACGCCTTGCTCGGATATCCCTTCATCACCTTGCAGCGGCCTTCCACCGTG CGCTTCATGCTCGAAGACCACCTGCGCCAGCGCGGACGCCAGCTGCCGGTGCAGTTCGAGAGTCATCAGTTGGCCACGGTCGGCCGCATGGTCGCCAGCG GTCTGGGAGTCAGTGCCGTACCGGCGCTGTGCCGTGCGCAAATGCTGGAACTCGGTGCGCGCTGCGTGGCGCTACGTGATCCGGTGATCGAAAAGCCGGT CGGTATTCTGACCAAGCCCGGCCACGAACTGTCGGTGGCGGCCCAGGCCATTGCCGATACCTTGCGCGCTGAACAGGGGTATCCAGGTCTTTTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGAGATCAAAGCTGCGGAAATCGCGGTTTGCGGCGCCTGCGCAAGCACGCTGAGGCGGGGCCGCCAATGGCCACGCTATCGAGCGTCGCGTGGCGATTTG CCGAGCAGCAGTTGCAAATCGATTCGTTCGGCCATCGCCTGATTGCCGATATCGCCGGGATGAAGCCTGTCGCCCGAGTCGTACCGCGCGAGAAGCCGTG TCGGGTGAGTGGGGTCACGTAGCCAGGCATCGAAGTCCAGCACCGCATCGAAACTGCCACTGGTGCGAATCCACTCATTGACCTGCTGACGCAGACGCTC TTTCTCCGGTGAGTAATAGTGGTGGATGGGGGAGTCCGGTAGCGCACCTTCGAATGGCAGCAGCGTCCCCGCGACGATGCGAACGTTGCGAAGATGCGCT TGCGTGATCAACTGCCGATAACCGGCTATCAACGCTTCGAAGCTGGGCGCGGGCGCATCCGGCGCGAAGGTGCTGCCAGGCCAGGCGATATCGTTTATTC
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MTVKQLRAFLSVAHTLSFAQACERLHLSQSALSLTIKALEDGLGGRLFSRTTRAVSLTPEGEALLPLARRLLADWDNAEDELRQRFTLKQGRVALASMPS FAGNLLPAVLRTFSDQYPSISVTVHDVINEQVMEMVRDRQVELGIAFEPEPSAPLTFTSLYTDRFVAVVPAESSLASQPEIAWDALLGYPFITLQRPSTV RFMLEDHLRQRGRQLPVQFESHQLATVGRMVASGLGVSAVPALCRAQMLELGARCVALRDPVIEKPVGILTKPGHELSVAAQAIADTLRAEQGYPGLLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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