Strain | Pseudomonas stutzeri strain NT0128 249_429018_65821923_23____28, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCCGCTGGCGAGTTCACGCTGCAGCCCAGCGACAAGCCCCTCGTGCTCATCAGTGGCGGTGTAGGGATTACCCCGACGCTGGCAATGCTCGAGGAAGCC GTCGCCACCGAACGACCGATCCACTTCATCCATTGCACTCGCAATGCCGACAGCCACGCGTTCCGCCAGACGATCGACGCACTGGCCGAGCGGCATGGGC ATCTCAAGCGCTTCTACTGCTATGACGAACATCAGGGCGAGGACAACCAGCCGGACGCTGTTGGTCTGATGACTGAGGAACGGCTGGATGCCTGGCTGCC TGCCGACCGCGATCTGGACGCCTATTTCCTCGGTCCAAAACCCTTCATGGCGGCGATTCGCCGGCAGTTGCGGACGCTGGGAGTACCGGAGCAGCAGACC CGCTACGAGTTTTTCGGCCCGGCTTCGGCGCTGGAGTGAGTTCGGGAGGGTCAGCCTGCCGCTGCCCCTCAAATCAGCCCATCGTCATGAGGGAATTCCG
|
|
DNA Sequence for Gene |
>UF78_RS05685
ATGACCCTGCAACCCTTTGATCCGCATCGCCTGCTCGTTATCGCCAATCTCTGCATGACGATCGGCCTGGTATTGCTTCTGTCCGGCGTCGCTGGTGCGT ACATGTTCGACCGCCATCTGCCGCTCGGTGCCGTGGTTGCCTGCCATGCGCTGGTGATTCTCGGTCCCACCGCGCTCAAGATCGGCTATGTGATGCGCTT GCTCGCGCAGCGTCAACTGATACTGGCGGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AATCAATGTGGCAGCAAGTTCGATGTAACTTGCTGTACTAATAGCATTGCCGTTTCGCTTAACTTTGCACTCGACATAGTTCCAACTAGCCACGATAACC ATTCGTCTGCCGTTTGTTCGCCAATGGAAACTCCTGAGACGAAACCGAGCTCTGAAACCATGAAGGCCGATGAGTTTATCGACCCTTTAGCGTCTGTATC CATTGAGGAGAAAAAGACATGCCAAACAAGAACCCCGGCAACTTTGCCAACGATCGCGAAAAAGCCTCGGAAGCTGGCAAGAAAGGTGGCCACAACAGTG GCGGCAACTTTGCCAACGACCGGGAAAAGGCCTCGGAAGCAGGCCGTAAAGGTGGACAGAACAGCCACGGCGGTGGACGCAACAGCAATAGCTGATTTGT CTCGCCATAAAAAGGCAAAGGTTAAACCCTTTGCCTTTTTTGTTTAAAACGTTTTCTTTTTAACTATTAAGTAAAAGTTAGCCGCGTGCTGTATTGCGAC
|
|
Amino Acid Sequence |
>hypothetical protein
MTLQPFDPHRLLVIANLCMTIGLVLLLSGVAGAYMFDRHLPLGAVVACHALVILGPTALKIGYVMRLLAQRQLILAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|