Pseudomonas stutzeri NT0128, UF78_RS05130
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 249_429018_65821923_23____28, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCTCGATGTCGATCGATTCAAGGACTATAACGACAAGCATGGCCACCTAGCCGGTGACCATGCCTTGTGCTTGGTTGTCGACACCTTGGGGAAATTGC TCCGTCCAACGGACAGCCTGGTGCGCTACGGTGGAGAGGAGTTCGTGATTCTGCTTCCCGATATGGCGCTGTGGGATGCGCGCGGGGTCGGCGAGCGCCT GCGCCAGAGCCTCGATGAGATCACCTCCTTCCGTTCGCCGATAGGCATCTTGCCTGGCGTGACGATTTCCATCGGTGTTGCACCGATGCAGCCCAACGAC GATTTGAAAGCGCTGATCCAGGTTGCCGACCAAGCGCTTTACCAAGCCAAGGCGCAAGGACGAAACCGCGTGTGCGGCTAAGCAGGCGCAGCATGTGCAG CGCGCCCCGGGCAACCGCAGTGCCGGCCTGAGCAAGTCTTCGCCGTATCTGCTTCTTGCATTACACTGGCGGGCGAACCTTTATAGACAGAGAAGAAACC
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| DNA Sequence for Gene |
>UF78_RS05130
GTGCTCAAAGCACTTAAGAAAATCTTTGGCAAAGGCCCGGCAGAGCTACCTACCGCCCAGCCCGCCAGCGACACCTCGAAGCCTACCGATACGCCTGCGC AACTCGAAGCGAGAGCGGACGCACCTGCAGCAACGGAAACCAAGCCCCGCCGGGAGCGTTCACGCAAACCCGCCGCACCACCCGCGCCAGCTTGGAAACT GGAAGACTTCCAAGTCGAGCCAGCCGAGGGCAAGACCCGTTTTCACGACTTCAAGCTCGCCCCCGAGCTGATGCACGCCATCCACGATCTCGGTTTCCCT TACTGCACACCAATCCAGGCGCAGGTTCTGGGCTTCACGCTCAAAGGCAGTGATGCGATCGGTCGCGCCCAGACGGGAACCGGCAAAACCGCTGCGTTCC TAATCTCGACGATCACCCAGTTGTTGCAAACCCCACCACCCAGCGACCGCTACATGGGTGAGCCTCGCGCGCTGATCATCGCGCCGACACGCGAACTGGT GGTGCAGATTGCCAACGACGCGCTGAACCTGACCAAATACACCGGTTTGAACGTGATGAGCTTCGTCGGCGGAATGGACTTCGACAAGCAACTCAAAGCG TTGGAAAGTCGCTATTGCGACATTCTGGTTGCCACACCGGGGCGGCTACTGGATTTCAACCAGCGCGGCGAAGTGCACCTGGACATGGTCGAGGTACTGG TCCTTGATGAAGCCGACCGCATGCTCGACATGGGCTTCATTCCACAGGTTCGCCAAATCATCCGCCAAACCCCGCCGAAGAGCGAACGCCAGACGCTGCT GTTCTCCGCCACCTTCACTGAAGACGTGATGAATCTGGCCAAACAGTGGACCACTGACCCGGCGATCGTCGAAATCGAAGCGGAACATGTGGCCAGCGAC ACCGTCGAGCAACACGTTTACGCCGTAGCGGGCAGCGATAAATACAAACTGCTCTACAACCTGATCACTCAGAACGACTGGACCCGCGTGATGGTATTCG CCAACCGCAAGGACGAGGTTCGCCGTATCGAGGAACGCCTGACCCGCGACGGAATCAGCGCCGTACAGATGTCTGGCGACGTACCCCAGCACAAACGTAT CCGCGCACTGGAAGGCTTTCGCGAGGGCAAGATTCGCGTCATGGTGGCGACCGATGTCGCGGGCCGTGGCATTCACGTCGATGGCATCAGCCACGTAATC AATTTCACCCTGCCGGAAGTGCCTGACGATTACGTGCACCGCATCGGCCGCACCGGTCGGGCCGGCGCCACCGGAACCTCGATCAGCTTCGCCGGCGAGG ATGACGCCTTTGCCTTGCCAGCGATCGAAACATTGCTAGGACGCAAGATCAGCTGTGAGATGCCTCCAGCCGAACTTCTGGCTCCCGTCCCGCCCAAGCG TTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACACCAATAGCACCTAACTATGTGCAGTAAAAAAGGCGAAGCCACTGATGGCTTCGCCTTTTTTATTGCCTTGCGCAATCGCCGTTCAAACCCGCCACAT GTTTCTGAACCCAATCAGTGCTGTCCGGCGAATGCCTTAGCTGAAATAAGTCGTGTACTTCATTAGCTTGGCTGACCCACTACGACTGATCCCACCGCTG CGCCGCAGCCTGATCGCTGCAGCGGCCTTCGACCCAACGCGGGCCTGACGGGGTGTCTTCTTTCTTCCAGAACGGCGCGCGGGTTTTCAAGTAATCCATC ACGAATCGGCAGCCATCGAACGCCGCCTCACGATGGGCGCTGGCGGCGCCGACGAAGACGATTGGCTCCCCCGGCTCGAGTCGTCCGACCCGGTGCAGAA TCTCCAGCTTGAGCAAAGGCCAACGTGCGGCTGCCTCCTCAATGATCTTCAGCAATGCCTTCTCCGTCATTCCGGGCGCGTGCTCGAGAAACATCCCTGC
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| Amino Acid Sequence |
>ATP-dependent RNA helicase RhlB
MLKALKKIFGKGPAELPTAQPASDTSKPTDTPAQLEARADAPAATETKPRRERSRKPAAPPAPAWKLEDFQVEPAEGKTRFHDFKLAPELMHAIHDLGFP YCTPIQAQVLGFTLKGSDAIGRAQTGTGKTAAFLISTITQLLQTPPPSDRYMGEPRALIIAPTRELVVQIANDALNLTKYTGLNVMSFVGGMDFDKQLKA LESRYCDILVATPGRLLDFNQRGEVHLDMVEVLVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVMNLAKQWTTDPAIVEIEAEHVASD TVEQHVYAVAGSDKYKLLYNLITQNDWTRVMVFANRKDEVRRIEERLTRDGISAVQMSGDVPQHKRIRALEGFREGKIRVMVATDVAGRGIHVDGISHVI NFTLPEVPDDYVHRIGRTGRAGATGTSISFAGEDDAFALPAIETLLGRKISCEMPPAELLAPVPPKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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