Pseudomonas stutzeri NT0128, UF78_RS06750
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 248_142671_20626156_22__28, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCCGGCATCAGGCCTTTGCCCTGGGTCGCGCGAACCGAGCTGCACAGGTTGGTCTTGTTGGATTTACAGAATTTGCATTGACCGCACTCGGCCGTATAC AGCGGGATCACGTGATCGCCTACAGCCACCGAGGTCACGCCCTCGCCCACGGCCTCAACGATACCGCCACCCTCATGCCCGAGGATGCAGGGGAACACGC CCTCCGAGTCCTGACCGGACAGCGTATAGGCATCGGTATGGCAAACACCTGAGGCGACGATACGCACCAGCACCTCACCGGCCTTGGGCGGCTCGACGTC CACTTCCACGATCTGCAAGGGTTGATTAGGGGCGAAGGCGACTGCCGCGCGGGATTTGATGGTCATGGACTCTACTCGCGAGTGGTTAACAGTGCCAGGC AGTGTAGTTTGCTTGGCCGCCAGGGTTAATGGCTCGATTATGGAAACATTATTGCCATATGGGGATAATCAGGCACACCCTACCACTGCAGGAGTTACCG
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| DNA Sequence for Gene |
>UF78_RS06750
ATGAATCGCTGGGAAGGTCTTGATGAATTCGTCGCCGTAGCCGAATGCGCAAGCTTCATGCGTGCGGCCGAGCAGTTACGGGTTTCGTCTTCGCATATCA GCCGTCAGGTGGCGCGCCTCGAAGAACGCCTGCAGGCTCGGCTGCTCTACCGCACCACGCGGCGAGTATCGCTGACGGAGGCCGGCCACACGTTTCTGGC GCGCTGCCAGCGGTTGATCGAGGAGCGCGACGAAGCCTTTCATGCCATCAGCGATCTGCACGCCTCACCGACAGGCCTGCTGCGCATGACCGCCGCGGTG GCTTATGGCGAGCGCTTCATCGTACCGCTGGTCAACGAGTTCATGGCGCAGCATCCACAGCTGCGAGTCGAGATCGAACTCTCGAACCGCACCCTTGACC TGGTCCAGGAGGGCTACGATCTGGCGATACGCCTCGGTCGGCTCAGCGAGTCGCGTCTGGTGGCAACGCGACTGGCACCTCGCGCCATGTATCTCTGTGC AGCGCCAGCCTATCTTGAGCACTACGGGCGGCCACACACCTTGTCGGAGTTGGCGCGCCATAACTGCCTGGTCGGCACGGGTGACACTTGGATGCTTCAA GTGGACGGCCGCGAGCACCCCTTCAAACCCACCGGCAACTGGCGCTGCAACAGCGGTCAGGCAGTGCTCGACGCCGCGCTGCGTGGCTTCGGCCTCTGCC AACTGCCGGACTATTACGTACAAGAACCGCTACGCCGTGGCGAACTGGTTTCGCTTTTGGAGGCCAACCAGCCACCGAACACGGCGGTCTGGGCCGTGTA TCCGCAGCGACGGTACCCTCTGCCGAAAGTGCGATTGCTGATCCATGCGCTCAAGGAAGGACTTTCCATGCGCCCCGAGTACCGTGACGAACGCGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTGCGACTGCGCCGCGCGTCCGACTGCCAAGCTCAGGCGGAACCCGGCTATTCTGGCCACGTCGATATTCTGTAGCCGGTGCCCTTTGCGCTTTGCGCT TTGCCTGGAGCTATCCGGCGATTCAATCAGGAGGACATCATGCAGATTCTGGTGAACAGCAATCACAGCGTCAACGTAACCAGCAACCTGGAGGAGCACG TAAAGGCAACGGTGGAGAGCGAGCTGGAGCGTTTCGATGATCAGCTGACCCGAGTCGAAGTTCATCTCAACGACGAGAACAGCGGAAAGAAGGGCCCTCA GGACAAGCGCTGCCAGATGGAGGCCAGGGTCAAAGGCCACGAGCCGATCTCGACGACCCACAAGGCCGACTCCATGACACTTGCCATCGATGGTGCCGCA GAGAAGCTCAGCCATGCACTGGCGCATGCGCTGGATAAGTTCAACCATCATTGATAACGACCTGCCGAACCAGGCCGTTCACATCACGAGGGACCGAACC
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MNRWEGLDEFVAVAECASFMRAAEQLRVSSSHISRQVARLEERLQARLLYRTTRRVSLTEAGHTFLARCQRLIEERDEAFHAISDLHASPTGLLRMTAAV AYGERFIVPLVNEFMAQHPQLRVEIELSNRTLDLVQEGYDLAIRLGRLSESRLVATRLAPRAMYLCAAPAYLEHYGRPHTLSELARHNCLVGTGDTWMLQ VDGREHPFKPTGNWRCNSGQAVLDAALRGFGLCQLPDYYVQEPLRRGELVSLLEANQPPNTAVWAVYPQRRYPLPKVRLLIHALKEGLSMRPEYRDERD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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