Pseudomonas stutzeri NT0128, UF78_RS05885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 215_49287_6544995, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTCGACGGGATTATCGGCGACCGAAAGAGCGCTCGAATGCATCGGGCAGCGCGTGGAAGCTAACCACCATTCCATGCTTCACACGTAAGATTCGGCCAC CCAGGGACAGGGTCAGCGGGCTACGTTCCGTAATTACCGCTCCGGAGTCCAGCAGCTCTTCGATGTGCTTGCGTAGCGCATGGTATTGCCGCTTTTCGTC TTGATGTTCCGGCATGATGCGTCCTCATCCATGAAAGGCGACGGAATTCTAGCAATCTGTGACTGATTTTACATATCAAAATGACATCATTCGTTACTGC AGAGCTATGCAAGTGCTTCGGTGGCGGTGGCGCCTCTCCAGCGGTCGCTGAATTGATTGTTTCGCCACGCCTTGGGTTCGCGCTGGCCAGGTCTCGACAA ATGGCTGCGTTGCGATCCGCAGATGGACGATAATCACTCTCGCACCGTGGTTAGCGTCCAAAGATTTGCAGTACAGAGCGGTGCCAATGAGCCGTAGTCG
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| DNA Sequence for Gene |
>UF78_RS05885
GTGCAGAGCCAAGGAAATTCACTCGTTAACACTTCGCGCAAAATCATCCATGTCGATTGTGACTGCTTCTACGCAGCCATCGAAATGCGTGACGATCCGA GTCTCGCGAATCGGCCCATCGCGGTGGGCGGGCTCGCCGACCGTCGCGGCGTCATAGCCACTTGTAATTACGAGGCGCGCGCTTACGGGGTGCGTTCGGC AATGGCGTCGGGGCATGCGTTGAAGCTTTGCCCGGATCTGCTGATCCTGCGGCCCCGTATGGACGCCTACAAGGAAGCCTCGCGCGAAATCCACGGCATC TTTCGTACCTATACCGATTTGATCGAGCCGTTATCGCTCGACGAGGCTTATCTCGACGTGAGTGCCTGCGAGCATTTCGCTGGCAGCGCCACGCGCATTG CCCAGGATATCCGCCGGCGGGTCTGGCAACAGCTGCGCATCACGGTGTCGGCGGGTGTCGCGCCGAACAAGTTTCTCGCCAAGATAGCCAGTGATTGGAA CAAACCGGATGGGCTGTTCGTGATCACTCCAGACCAGATCGATGACTTCGTATTGGCGCTGCCGGTCACCAAGTTGCATGGGGTCGGTCGAGTCACCGCC GACAAGCTGAAACGGCTGGGTATTCATACCTGTGCTGATCTGCGCAGCTGGAAACGCCTGGATCTGGTTCGGGACTTCGGTTCGTTCGGCGAAAGGCTGT GGGGGTTGGCGCATGGAGTCGACGAGCGTCTGGTTCAGGTCGAGAGTCGGCGTCAATCGGTCAGCGTCGAGAACACTTACGATCGCGACTTGCCAGATCT TGCGGCCTGTCTCGAGCGGCTGCCCGAATTGCTTGAACAACTCAATGGCAGGATGGCGCGGCTCGATAGCGGCTACCGTCCGGGCAAACCTTTCGTCAAA CTCAAATTCCATGACTTCACCCAGACGACCCTCGAGCAGGCGGGTTCCGGCCTCGAACTGGAGGATTACGCCGACCTTCTTGCTGGTGCCTTTGCGCGCG GCAAGCGTCCGGTGAGGCTGATTGGCGTCGGGGTTCGCTTGATCGACCTGCGCAGTGGTTTCGAGCAACTTCGCCTGTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCGCCCGCCGCGCGGACCCACCTCTGGTTCAGGCATTCAAGAAGGCTGGTTAATGACCAGGCTTCCACGACGAAACCTACCGCCAGAAATAAGCAGGG CCGCTCACTGAGCGGCCCTTTGCCTGGGGTGTAAAAGAGGGGATCCCTGGCCTGCCTGTACCAGGGCCCCCGAAACGGTTATCTGGATATTTGCATGGGG CGTGCCAGTTTTCAGCGAGCGGTTTGCCGCATAGTGTTTGCCCGATCCGTCGAATGCCGTCAGGCGACTTCCGAGCAGCCGCACAGCCTGAAGCCGCGCG GCATGCGGCGATGAGAGGGTCGGCGGGGAAATGTCAGAGACAGCGCTTTCGCGCTTCGAGCGGAGCGGGCGTGCGGGACGCCCGGTTTTCTGCACTGTTT CAGTCTGTTTGAGTTGCTTTCGTTGGGTGCAATGCCCAGCTTTGGCGCAGCTTAGTTCTGTTCCGGCCAGACGCGTAGCGGGGCGCCCTCGGTGGGCCAG
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| Amino Acid Sequence |
>DNA polymerase IV
MQSQGNSLVNTSRKIIHVDCDCFYAAIEMRDDPSLANRPIAVGGLADRRGVIATCNYEARAYGVRSAMASGHALKLCPDLLILRPRMDAYKEASREIHGI FRTYTDLIEPLSLDEAYLDVSACEHFAGSATRIAQDIRRRVWQQLRITVSAGVAPNKFLAKIASDWNKPDGLFVITPDQIDDFVLALPVTKLHGVGRVTA DKLKRLGIHTCADLRSWKRLDLVRDFGSFGERLWGLAHGVDERLVQVESRRQSVSVENTYDRDLPDLAACLERLPELLEQLNGRMARLDSGYRPGKPFVK LKFHDFTQTTLEQAGSGLELEDYADLLAGAFARGKRPVRLIGVGVRLIDLRSGFEQLRLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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