Pseudomonas stutzeri NT0124, TK79_RS20940
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0124 221_623171_73872204_18794, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCATCCTGGTGGGCGAGATGCGCGACTTGGAAACCATTCGCCTGGCACTGACCGCCGCGGAAACCGGCCACCTCGTGTTCGGCACGCTGCACACCACCT CCGCCGCCAAGACCATCGACCGCGTGGTCGACGTGTTCCCGGCCGAAGAAAAATCCATGGTCCGCTCGATGCTCTCCGAATCGCTGCAGGCGGTGATCTC GCAGACCCTGCTGAAGAAGATCGGCGGCGGCCGCGTCGCGGCCCACGAGATCATGATCGGCACCCCGGCGATCCGTAACCTGATCCGCGAGGACAAGGTG GCGCAGATGTACTCGGCGATCCAGACCGGCGGTTCGCTCGGCATGCAGACCCTGGACATGTGCCTCAAGGGGCTGCTGGCCAAGGGCCTGATCAGCCGCG ACAGTGCGCGGGAAAAGGCCAAGCAGCCCGAGAATTTCTAAACGCCTGACAACCCCGGACGCCGCCCGGTGCGGCGCTTGCCACGATTGCGAGTACGACG
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| DNA Sequence for Gene |
>TK79_RS20940
ATGGAATTCGAGAAACTTCTGCGCCTGATGGTCGAAAAAGGCGGCTCCGATCTGTTCATCACGGCTGGCGTGCCGCCGTCGATGAAGGTCAACGGCAAGA TCATGCCGGTGAGCAAGACGCCCATGTCGCCGGAGATGACCCGGGAAACCGTGCACGGCGTGATGAACGAGCAGCAGCGCCGCGAGTTCACCGAGAACCA CGAATGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGCTTCCGTGTCAGCGCGTTCTATCAGCGAAACCTGGCCGGCATGGTGCTGCGTCGCATCGAG ACCAACATCCCGACCATCGAAGAACTCAAGCTGCCGGACGTCCTGAAGAAGCTGTCGATGACCAAACGTGGTCTGGTGCTGTTCGTCGGCGCCACCGGTA CCGGCAAGTCGACGTCGCTGGCCTCGATGATCGGCTACCGCAACAAGAACTCCAGCGGGCACATCATCTCCATCGAAGACCCGATCGAATTCATCCACCA GCACCAGAATTGCATCGTCACCCAGCGCGAAGTGGGCATCGACACCAGCTCCTTCGAGGTGGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATC CTCATCGGCGAGATCCGTACCCGCGAAACCATGGATTACGCGGTCGCCTTCGCCGAAACCGGCCACCTGTGCCTGGCCACGCTGCACGCCAACAACGCCA ACCAGGCGCTGGACCGCATCATCAACTTCTTCCCGCCGGACCGGCACAACCAGGTCTGGATGGACCTGTCGCTCAACCTCAAGGCCATCGTCGCCCAGCA GCTGGTTCCGACCCCGGACGGCAAGGGTCGTCGTGCGGTCATCGAGGTGCTGATCAATACGCCGCTGGCGGCCGACCTGATCCGCAAGGGCGAGGTGCAC GAGCTGAAATCGCTGATGAAGCGCTCCACCGAGCTGGGTATGCAGACCTTCGACCAGGCGCTGTACAACCTCTACGTGCAGGGCGAGATCACCTACGAAG ATGCCCTGCTGCATGCTGACTCGGCCAACGACCTGCGACTGCTGATCAAGCTGGGTTCGGAAACCGACGGTGAGCACCTGACCAGCGTATCCCAGGGCCT GAGCCTGGAGGTCAGCGACGAGGACCCGGGCCGGCGCTTCCGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGTCCGCGTCCGGCTGCCGGCCGATGCGCTTGCCCTGCCGGGCGGCAACGCGCTCGGCCTGGCCATCACGCTGCGCACCGGCGCGTGCGCGACTCATCA GTTGCGGAATCAGCACGCCTTCGGGCAGGTTCTTCCAGAACCGTACCGGCAGGTTGCTTTGCAGCACGCTGCGGTTCAATCGGGCCGGATTGAAGGTGCT CTCGTAATAGGCCTTCCATAGTTCGCCGCCGGGGTCGGCAGCGCTCTGCGCCAAGCGCTGCCATTGCGGCGGGCAGGGGCGGACGTGATGAAGGGTCTGA CCGTTCCAGCAGACACCATCGTCCGGTGTCGCGATCAGCCAGCTGTTCTCGCCCATGCGCTCGGCGAAATGGTGTGCGGCCCATGGCAGCACGTCGTGCG CCGGTTCGAACCAGGCTACATGCCGCGGGCCGTCGCCATCTTCCAGCGGGCTGAAGCGCAGGAAGGCATGCAGATGGTGCGCCTCGCGGCGAACCGCCTT
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| Amino Acid Sequence |
>twitching motility protein PilT
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKIMPVSKTPMSPEMTRETVHGVMNEQQRREFTENHECNFAISARGIGRFRVSAFYQRNLAGMVLRRIE TNIPTIEELKLPDVLKKLSMTKRGLVLFVGATGTGKSTSLASMIGYRNKNSSGHIISIEDPIEFIHQHQNCIVTQREVGIDTSSFEVALKNTLRQAPDVI LIGEIRTRETMDYAVAFAETGHLCLATLHANNANQALDRIINFFPPDRHNQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLINTPLAADLIRKGEVH ELKSLMKRSTELGMQTFDQALYNLYVQGEITYEDALLHADSANDLRLLIKLGSETDGEHLTSVSQGLSLEVSDEDPGRRFR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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