Strain | Pseudomonas stutzeri strain NT0124 221_623171_73872204_18794, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCGGTCGTGGTTCACCGCCCAGACGTAGATCAGCCAGTTGGCCGCGATCAGCACGCTGGAGATGCCGAGCACGCCGAGGCGACGTGGATGCGCCAGCAG TTCGCGCCACCAGCCCGGATGACGCCAGACCAGCAGCACCAGCGAGCCGAACACGGCCGACCAGATCACCCGCTGAGTGACGATCTCGAGCGCCCCGTAT TGTTCGAGTGCCTTGAAGTAGAGCGGGAACATGCCCCAGATGCTGAAGGTGGCCAGCCCCAGCAGATAACCCTTGCGCAGATTGGCGGTAGCCATGACGT CCTTCGACGAGCAGCGGAGAGCCGGCCATTTTGCGCCTTTGGCCAGAGGAGAGAAAGGTTAGTCAGCTAACAGAGCGGCGCCGCGCGACGGGCTGCCCAA TTGGTCAGAAACGGGGGGAACGCTCGGCGGCTTGTGCTCGTCTCATCTGCATCGCTAATCGAAACGGCAGCACGCGGATCGGCGCGTGCGGAGGGTGGCA
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DNA Sequence for Gene |
>TK79_RS20585
ATGCGCTTGCAGAATCAGGTGGCTCTGGTCACCGGCAGCACCCAGGGCATCGGCCGCGGCATTGCCGTGCGCCTGGCTGAAGAGGGCGCCGACATTGTCA TCAACGGCCGCGAGAACGACGAACAGGCCCGCGCGAGCGTCGAGCAGGTCCGCGCCCTGGGCCGGAGGGTGTGCTTCATCGCCGCCGATGTCGGTGACGT CGAGCAGTGCCACCGGCTGGTGTGCGAGAGCATCGCGCAGATGGGGCAGCTGGACATCCTGGTCAACAATGCCGGTGTGCAGCGGCACGCGGCGTTCCTC GACGCGCAGGCGGACGATTATGATCAGGTGCTGAACGTCAACCTGCGTGGGCCGTTCTTCCTCGCCCAGGCGTTTGCCCGCCATTTGCGCGAGCAGGGCC GCGGCGGACGCATCATCAACAACAGCTCGGTGCACGAAGAGCTGCCGCATCCCAACTTCACTGCCTACTGCGCGAGCAAGGGCGGACTGAAGATGCTGAT GCGCAACATCGCCATCGAGCTGGCGCCGCTGGGCATCACGGTGAACAACGTGGCGCCCGGCGCGGTGGAAACGCCGATCAACCGCGAGCTGATGAATCAG CCGGACAAGCTTGCCAACCTGCTGCAGAACATCCCTGCCGGCCGTCTCGGCCGCCCGCACGACGTCGCCGGCGTCGTTGCCTTTCTGGCCTCACCCGACG CCGAGTACATCACCGGGACTACGCTGGTGGTCGATGGCGGCCTGCTATGGAACTACAGCGAGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGATACCCCGCCGTGCCAGCCGTTCAGCCACGACACCAGCGCCATCTCGCGGGCCGACACGCTCACGCCTGCCGAGCGCTATCAGGAACTCTTCGTCGC GGTGCAGATGCAGCGGGTGTTTCCCGACAGCAAGACCTTCGTCGACTGTGCGCCGCGTCGGCACCCCGAAGCCATCCTCGAGGACTATCGCGCCCGCTGC GGCGAGCCGGGCTTCGACCTGGAGGCCTTCGTCCATGAGCATTTCAGCCTGTACGAAATGCCGGTCAAGGCGTTCGTCGCCAACCCCGACGACAGCCTGG CCGAGCATATCGACCGACTCTGGCCGATCCTCACCCGCCACCCTCAGGACCACCCCGAGCACTCCTCGCTGCTACCGCTGCCGCACGATTACGTGGTGCC GGGCGGGCGCTTCACCGAGCTGTACTACTGGGATTCCTATTTCACCATGCTCGGCCTGGACGAGAGCGGGCATTGCGACCTGCTGCGGGCCATGGCGGAC
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Amino Acid Sequence |
>sugar dehydrogenase
MRLQNQVALVTGSTQGIGRGIAVRLAEEGADIVINGRENDEQARASVEQVRALGRRVCFIAADVGDVEQCHRLVCESIAQMGQLDILVNNAGVQRHAAFL DAQADDYDQVLNVNLRGPFFLAQAFARHLREQGRGGRIINNSSVHEELPHPNFTAYCASKGGLKMLMRNIAIELAPLGITVNNVAPGAVETPINRELMNQ PDKLANLLQNIPAGRLGRPHDVAGVVAFLASPDAEYITGTTLVVDGGLLWNYSEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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