Strain | Pseudomonas stutzeri strain NT0124 221_623171_73872204_18794, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGTCTATCAGCTGATCACGCGGCGCCTGGCCGGAACCGACCATCCGGTGACCAGCAACTACCTGACCAGCCTGGTCGGCTGCGTGGCCCTGAGCGTGCT GGTGATCTTCAACTGGCGCACGCCGACGCTGCACGACGCGCTGCTGATGGGCGCCCTCGGTGGCATGGCCATGCTCGGCCATCTGCTGCTGACCAACGCC TTCCGCTTCGCCAGCGCGGCGACACTGGCGCCGTTCACCTACAGCCAGATCGTGTTCGCCGGGGTGGTGGGTTACCTCGCCTTCGATCACGCACCGGATG CCGGCGCCCTGATCGGCATGGCGGTGATCATCGCCAGCGGGCTGTGCATGGCCTATGTGCAGCGCCGCCAGCCCGCAGCCGGCGGATAAACGGCAAATGT GCCATTCGGATGGCCGAACAGCTTCTCAGCATCGATATTGAAATGAACAGACAGGGCGATTCGACCCTTGCGTGCAACGCATACAACAAACGGAGCCTAT
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DNA Sequence for Gene |
>TK79_RS19720
ATGCCGCGACTCTCTCATCATGACCTGCGCCGCAACTTCCGCGAGCTGCTCAACGCCGACCGCTGCTTCCACACGGCGTCGGTGTTCGACCCGATGTCGG CACGCATCGCCGCCGATCTCGGCTTCGAGGTCGGCATTCTCGGTGGCTCGGTGGCCTCGCTGCAGGTGCTGGCCGCGCCGGACTTCAACCTCATCACCTT GAGCGAGTTCGTCGAGCAGGCCACGCGCATCTGCCGCGTCGCCCAGTTGCCGGTGCTGGCCGATGCCGACCACGGTTACGGCAACGCGCTCAACGTGATG CGCACCGTTTCCGAACTGGAGCGCGCCGGGATTTCCGCGCTGACCATCGAGGACACCCTGCTGCCACCCAAATTCGGTCGCCGCTCCACCGACCTCATCG GCATGTTCGAGGCCGTCGGCAAGATCCGCGCGGCGCTGGAGGCGCGAGTCGATCCGGAAATGGCCATCATCGGTCGCACCAACGCCGGCGTGATCGGCTT CGAGGAAGTCATCGCGCGCGCCCAGGCCTACGAAAAGGCCGGTGCCGATGCCATCTGCCTGGTCGGCATCGAGGATTTCGATCACCTGGAAAGCATCGCC AGCCAGCTCAGCAAGCCGCTGATGCTGGTCACCTACGGCAACCCCAACCTGCGCGACAACGCGCGGCTGGCCGCGCTCGGCGTGCGCATCGTGGTCAACG GCCACGCAGCCTACTTCGCAGCGATCAAGGCGACCTACGACTGCCTGCGCGAGCAGCGTCAGGTCGACGCCCTGGACCTCAACGCCTCGCAGTTGTCGGT CAAGTATTCCACCGCGGACGAGTATGTCGTCTGGGCCGAGGAGTACATGCAGGTCAAGGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGCTGACCCGCCCGGACAGCCATCGCTGCCCGGGTGGGCAACACCGCCGCCACTGGAGCCTGGATGAGCCCACCCCTGTTGACCTTCATGGTCGCCTT CGCCGCCTTTCTCGGGCCGTTCACTCAGACCGTGTATGCGCCGATCCTGCCGGAGCTCGGTGGTGCGCTGCACACCACGCCGTTTCTGATCAACCTCAGC ATCTCGATCTTCACGCTGGTGCTGGCCTTCATGCAGATCATCTACGGGCCGCTGGTGGATCGCAGTGGGCGCAAGCGCACCCTGCTGGCCGGCTTGGCAA TCTATATCGTCGCTTCGCTGGGCTGTTTCCTGGCCGATCGCATCGAGACACTGCTGGCGTTCCGCGCGCTGCAGGCGGTCGGCATCGCCGCCGGAGCGGT GGTGGCGGTCACGGTGATCGGCGATCGCTTCGAAGGCGCCGCGCGCGGCCGGGCGATGGGTTCGTTCCAGATGATGGTGGCGCTGGGGCCGGTGATCGGC
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Amino Acid Sequence |
>oxaloacetate decarboxylase
MPRLSHHDLRRNFRELLNADRCFHTASVFDPMSARIAADLGFEVGILGGSVASLQVLAAPDFNLITLSEFVEQATRICRVAQLPVLADADHGYGNALNVM RTVSELERAGISALTIEDTLLPPKFGRRSTDLIGMFEAVGKIRAALEARVDPEMAIIGRTNAGVIGFEEVIARAQAYEKAGADAICLVGIEDFDHLESIA SQLSKPLMLVTYGNPNLRDNARLAALGVRIVVNGHAAYFAAIKATYDCLREQRQVDALDLNASQLSVKYSTADEYVVWAEEYMQVKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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