Pseudomonas stutzeri NT0124, TK79_RS19270
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07696 | 7TMR-DISM extracellular 2 | IPR011622 | 7TM-DISM receptor, extracellular domain, type 2 | 36 | 172 | 3.8E-25 |
| Coils | Coil | Coil | - | - | 417 | 437 | - |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 438 | 610 | 2.7E-67 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 443 | 614 | 3.3E-60 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 454 | 609 | 1.33E-49 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 449 | 605 | 5.6E-50 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 445 | 607 | 8.4E-47 |
| PANTHER | PTHR46663 | DIGUANYLATE CYCLASE DGCT-RELATED | - | - | 393 | 607 | 1.3E-67 |
| Pfam | PF07695 | 7TM diverse intracellular signalling | IPR011623 | 7TM-DISM receptor, extracellular domain, type 1 | 183 | 387 | 2.9E-38 |
| Gene3D | G3DSA:2.60.40.2380 | - | - | - | 30 | 178 | 2.5E-25 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 444 | 610 | 1.1E-45 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 450 | 608 | 6.7195E-63 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.