Strain | Pseudomonas stutzeri strain NT0124 221_623171_73872204_18794, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGATGGCCTCGACCGTCAGGTTGCGCAGGGCGATCAGAGCCTGCAGCGGCTGCTGCTGATTGCAGCTGCACAGACGCTCGGTCATCTGCTCAGGCGGCA GGCGGATCTGATTGAGCATCTCGTGGAACAGGTGCGCCTTGTTCTGGAAGTGCCAGTACACGGCGCCGCGCGTCACGCCAGCGTCGCGCGCGATCTGATC GAGACTGGTGTGGGCTACTCCCTTGTCCAGAAACAGCCGCTCGGCGGAGGCGAGGATGGCGATGCGGGTCTTCTCGGCTTCTTCTTTGGTTCGGCGCATG GGCAGGTTCGGCGGTAGCGGCTGCTTCAGGCATCCAGCAGCGGTGGAGGCGACCAGTGTAACGAGGCATCTCGTCGCGATGCATGTTTACAATCGGCGGT GTATGTAACAGCATCTTGCACGCCGGTGCAATTGCCCCACCGAGGCCGCGGTCCAAGCATTGGCCTCGGCACGTCCCTTTTCCTGCTTTGCGAGCCTCTG
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DNA Sequence for Gene |
>TK79_RS19065
ATGTCTTTGCGGATTCTCCTCATCCTGGGCGCGCTCAGCGCGTTCGGTCCCCTGGCCATCGACATGTACCTGCCTGCATTTCCGCTGATCGCGCAGGCCT TTGGTACCAGTGTCGATCACGTCCAGCTGTCGTTGGCGGCGTATTTCGTCGGTCTGGCCATCGGTCAGCTGGTCTACGGTCCGCTGGCCGATCGCTACGG GCGGCGCGGGCCGCTGCTGGTGGGCGTGACCCTGTTCACCCTGGCATCGCTGGCCAGCGCCTTCGCACCGTCGATGGACTGGCTGATCGGCGTGCGCTTC GTGCAGGCGCTGGGTGGCTGCGCCGGCATGGTGGTGGCGCGGGCCGTGGTGCGCGACCTCTGCGATCCGATGACCAGCGCCAAGGTGTTCTCACAGCTGA TGCTGGTCATGGGCCTGGCGCCGATCCTCGCGCCGGTGGCCGGCGGTGCGTTGCTGGCGACGTTCGGTTGGCCGTCGATCTTCATCCTGCTGACGTTGTT CAGCGCGCTGTGCCTGGTGGCGGTGGCGCTCTGGCTGCCGGAAACCTACCCGCCGGGCTTGCCGCGCCAGCCGATGGCCGGGGCCCTGGGTCAGTACTTG CGGTTGTTCCGCGATCGTTTCTTCATGGGCCACGTGCTCACCGGCGCGCTGTGCATGGCGGGGATGTTCGCCTACATCACCGGCTCGCCGTTCGTCTTCA TCGAGCTGTACGGCGTCAAGCCCGAGCATTTCGGCTGGCTGTTCGGTATCAATGCGGCGGGCTTCATCCTGATGGCGCAGGTGAACGTGCGGCTGGTGCG CTGGCGCGGGCCGGAATTCTGGGTGCGGCGCTGGGTGTGGTTCTTCTTCGCCAGTGCGCTGGCGTTGCTGGCAGTGGCGGCGGCGCAGCCCGAATCGCTC TGGCCCTTGCTGATCCCGCTGTTCTGTTGTGTGTCCTGCCTGGGCTGCCTGCTGCCCAATGCCACCGCCTGCGCCATGGCCGATCAGCGCGCCAATGCCG GCAGCGCCTCGGCTCTGCTCGGCAGCCTGCAGTTCACCATCGCGGCCATTGCCGCTTCCGCGGTGGGGGCGCTGCACAACGGCACCGCGGTGCCGCTGGC GGCGATCATGAGTCTGTGCGGGCTGCTGGCGACGTTGGTCGCCTATGGCACCGCCCGCGCCAGCACGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTCAGGCGCTCAGCGGCAGCCGATGGGGCGCCTGCAGGCGCCGCTGCAGGGTCTCGGCGAAGGCCCTGGCCTCGGCTTCGCTGCGAAAGGTGATGCGCT GGCGATCCAGGCAGACCTGCCAGGCGCTATCGGGGTGGGGCGTCATGGGGCGGACGAGAATGTGCATGGCGATCTCCTCACGTGTCGAACGCCGCACAGT CTAGGCGCAGCCATGGCTCGCGCGGCGAGCCATGGTGTCGCAGGTCGGCCTTGCGCCGACGAATGGCTCAGTAGGCCAGGCGGGCGTCCAGGCTGTTCTG CGCCAGGCGGCGGGCCTGGGCTTCGGTCATGCCCAGGCTTTCGTGCAGCGCGACGAAATTCTCCGTGACATAGCCGCCAAAATAGGCCGGATCGTCGGAA TTCACCGTGACCTTCACGCCCTGCTCCAGCAGGTCGAGGATGTTGTGCTGACGCATGTCGGCAAACACCTTGAGCTTGGTGTTGGACAGCGGGCAGACCG
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Amino Acid Sequence |
>Bcr/CflA family drug resistance efflux transporter
MSLRILLILGALSAFGPLAIDMYLPAFPLIAQAFGTSVDHVQLSLAAYFVGLAIGQLVYGPLADRYGRRGPLLVGVTLFTLASLASAFAPSMDWLIGVRF VQALGGCAGMVVARAVVRDLCDPMTSAKVFSQLMLVMGLAPILAPVAGGALLATFGWPSIFILLTLFSALCLVAVALWLPETYPPGLPRQPMAGALGQYL RLFRDRFFMGHVLTGALCMAGMFAYITGSPFVFIELYGVKPEHFGWLFGINAAGFILMAQVNVRLVRWRGPEFWVRRWVWFFFASALALLAVAAAQPESL WPLLIPLFCCVSCLGCLLPNATACAMADQRANAGSASALLGSLQFTIAAIAASAVGALHNGTAVPLAAIMSLCGLLATLVAYGTARASTE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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