Pseudomonas stutzeri NT0124, TK79_RS18690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0124 221_623171_73872204_18794, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACGAAGCGCGTCTTGCCACAGCCGGTCGGGCCCTTGATCAGCACCGGCATGCCGTGCTGCCAGGCCTGCTCGAACAACTGCTCCTCGTTGCCCAGCGGT TGATAGAAAGGCGCGTCCGGCGTGCCAGCGGCGATTCGGATTTCAGGCGCGTTCACAGGCAGTACCTCACGACAGCGGTTGGTTATTTTCCATCGCCACG CTACCGGCCCCGTGCGACCCCCTCAAGCCGCGCGCCGGCAAAGCTTGATTGCGGTCAAGTCTGCGTCGAGATCTGCGACGAACAGGCGGCGAAACGAGGC GCTTTGCCGCAGCTGTAGCGGCGATCTCCGCGACAAGGCGTCACGTCTGGGGCATCTCGGGGGGCCTCTTGATTACCGTCAAGCGCCTTCGCTTCCGAGC TCTCATAGCATCCGAATCGCAAAAAGAAGAAGTCCCCGGGAACTGCCACACCGCCGTAACTAGCAGGAGTCGCGCCTGAGCGCTCCCATAGGAGAGAAGG
|
|
| DNA Sequence for Gene |
>TK79_RS18690
ATGAGCAATGTCGGTAAACCTATTCTGGCTGGCGTGATCGCCGGCCTTTCGCTGCTAGGTCTGGCAGTCGCCCAGGCTGCCGCCCCAGAGATGACCGCCG AAGAGAAAGAGGCGGCCAAGCAGATCTATTTCGAACGCTGCGCCGGTTGCCATGGCGTTCTGCGCAAGGGCGCAACGGGCAAGAACCTCGAACCGCACTG GACCAAGACCGATGCGGACGGCAAGAAGACCGAGGGCGGCACCCTCAATCTGGGCACCAAGCGCCTGGAGAACATCATTGCCTATGGCACCGAGGGCGGG ATGGTCAACTACGACGACATCCTCACCAAGGAAGAGATCAACATGATGGCGCGCTACATCCAGAACACCCCGGATGTGCCGCCGGAGTTCTCCCTGCAGG ACATGAAGGACAGCTGGAAACTCATCGTTCCGGTTGATCAGCGTCCGAAGAAGCAGATGAACAAGATCAACCTGAAGAACGTCTTCGCCATCACCCTGCG CGATGCCGGCAAGTTGGCGCTGGTGGACGGCGACACCCACACCATCTGGAAGGTGCTGGACACCGGCTACGCCGTGCACATCTCGCGCCTGTCCGCCTCC GGTCGCTATGTCTACACCGTGGGCCGCGACGGCCTGACCACCATCATCGACATGTGGTACGAGGAGCCGACCACTGTCGCCACCGTGCGCCTGGGTTCCG ATGCCCGCTCCGTGGACACCTCCAAGTTCAAGGGCTACGAGGACAAGTACCTGATCGGTGGCACCTACTGGCCGCCGCAGTACTCGATCATGGACGGCGA GACCCTGGAGCCGATCAAGGTCGTCTCCACCCGTGGCCAGACGGTCGACGGCGAATACCACCCCGAACCGCGCGTGGCGTCCATCGTCGCCTCGCACATC AAGCCGGAGTGGGTGGTCAACGTGAAGGAGACCGGGCAGATCATCCTGGTCGACTACACCGACCTGAAGAACCTCAAGACCACCACCATTGAGTCGGCCA AGTTCCTTCACGACGGCGGCTGGGACTACTCCAAGCGCTACTTCATGGTCGCCGCCAACGCCTCCAACAAGGTCGCGGCAGTCGATACCAAGACCGGCAA GCTGGCCGCGCTGGTCGACACCGCGAAGATCCCGCACCCGGGGCGCGGCGCCAACTTCATCCACCCGCAGTTCGGCCCGGTCTGGACCACCGGCCACCTG GGTGACGACGTGGTCTCGCTGATCTCCACCGCATCGGACGATCCGAAGTACGCCAAGTACAAGGAGCACAACTGGAAGGTGGTGCAGGAGCTGAAGATGC CGGGCGCCGGCAACCTGTTCGTCAAGACCCATCCGAAGTCGAAGAACCTCTGGGCCGACGCGCCGATGAACCCCGAGCGGGAAGTCGCCGAATCCGTCTA CGTCTACGACCTGGCCGATCTCAGCAAGGCGCCCAAGCGGCTGGACGTCGCCAAGGACTCCGGCCTGCCGGAAAGCAAGGCGATTCGTCGTGCCACCCAC CCCGAGTACAACGAGGCGGGTGACGAGGTGTGGATCTCCCTCTGGGGCGGCAAGACCGACCAGTCCGCGATCGTGATCTACGACGACAAGACGCTGAAGC TGAAGAAGGTGATCACCGACCCGGCGATCGTCACGCCGACCGGCAAGTTCAACGTCTTCAACACCATGCACGACGTGTACTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCGCCCGAGGATTGCCTGTTAACACCCACCACGCCCGGCGTGGTGGGTCTGGCAAGGGAACCGATTCCATGACCGATCAAGACGGCAACAAGCAACAAA AGGGCGGCGGCATCCTGGCACTGCTGCGGCGGCCGAGCACGCGCTATTCGCTCGGCGGCATTCTGGTAGTGGGCATCGTTGCCGGCATCATCTTCTGGGG CGGGTTCAACACCGCGCTGGAAGCCACCAACACCGAAACCTTCTGCATTTCCTGTCACGAGATGGGCAACAACGTCTACCCCGAATACAAGGAAACCATC CACTACAGCAACCGCACCGGCGTGCGTGCCACCTGCCCGGACTGCCACGTCCCGCGCGACTGGACGCATAAGATGGTGCGCAAGGTCGAGGCCTCCAAGG AGCTGTGGGGCAAGATCGTCGGCACCATCGACACCCAGGAGAAGTTCGAAGCCAAGCGGCTGACGCTGGCCCGACGTGAATGGGCGCGGATGCGGGCATC
|
|
| Amino Acid Sequence |
>nitrite reductase
MSNVGKPILAGVIAGLSLLGLAVAQAAAPEMTAEEKEAAKQIYFERCAGCHGVLRKGATGKNLEPHWTKTDADGKKTEGGTLNLGTKRLENIIAYGTEGG MVNYDDILTKEEINMMARYIQNTPDVPPEFSLQDMKDSWKLIVPVDQRPKKQMNKINLKNVFAITLRDAGKLALVDGDTHTIWKVLDTGYAVHISRLSAS GRYVYTVGRDGLTTIIDMWYEEPTTVATVRLGSDARSVDTSKFKGYEDKYLIGGTYWPPQYSIMDGETLEPIKVVSTRGQTVDGEYHPEPRVASIVASHI KPEWVVNVKETGQIILVDYTDLKNLKTTTIESAKFLHDGGWDYSKRYFMVAANASNKVAAVDTKTGKLAALVDTAKIPHPGRGANFIHPQFGPVWTTGHL GDDVVSLISTASDDPKYAKYKEHNWKVVQELKMPGAGNLFVKTHPKSKNLWADAPMNPEREVAESVYVYDLADLSKAPKRLDVAKDSGLPESKAIRRATH PEYNEAGDEVWISLWGGKTDQSAIVIYDDKTLKLKKVITDPAIVTPTGKFNVFNTMHDVY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|