Pseudomonas stutzeri NT0124, TK79_RS18280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF69255 | gp5 N-terminal domain-like | - | - | 110 | 198 | 1.07E-32 |
| Gene3D | G3DSA:2.30.110.50 | - | - | - | 1 | 99 | 7.3E-17 |
| SUPERFAMILY | SSF69349 | Phage fibre proteins | - | - | 188 | 370 | 1.49E-41 |
| Gene3D | G3DSA:2.40.50.230 | - | IPR037026 | Vgr protein, OB-fold domain superfamily | 101 | 202 | 4.3E-43 |
| Pfam | PF05954 | Phage tail baseplate hub (GPD) | - | - | 2 | 67 | 9.3E-9 |
| NCBIfam | TIGR01646 | JCVI: type VI secretion system tip protein VgrG | IPR006533 | Type VI secretion system, RhsGE-associated Vgr protein | 2 | 250 | 2.8E-70 |
| SUPERFAMILY | SSF69279 | Phage tail proteins | - | - | 1 | 110 | 3.23E-24 |
| Pfam | PF04717 | Type VI secretion system/phage-baseplate injector OB domain | IPR006531 | Gp5/Type VI secretion system Vgr protein, OB-fold domain | 132 | 199 | 3.1E-14 |
| PANTHER | PTHR32305 | - | - | - | 1 | 364 | 2.0E-42 |
| NCBIfam | TIGR03361 | JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain | IPR017847 | Type VI secretion system, RhsGE-associated Vgr family subset | 1 | 268 | 3.3E-119 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.