Strain | Pseudomonas stutzeri strain NT0124 217_114591_13880256_18357, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCGGTCCGATGCTGCTCAAGGTCAACACGCCGATCAGTGACGAAGACACCGGCGGCTCGCTGCACGACCGTCTCGCCTTGCTCGGCGCGCAAGCCGTGG TACAGGCCGTCGACGCCCTGGCCACCGGCACCCTGGCGCCCGAAGTGCAGGACGACAGCCTGGCCACTTATGCGCACAAGCTGAGCAAGGACGAGGCGCG CATCGACTGGACCCGCCCGGCCGTCGAGTTGGAGCGGCTGATTCGCGCCTTCAACCCCTGGCCGATCTGCCACAGCACGCTGAACGGCGAAACGCTGAAG ATTCACGCCGCACGCCTCGGCGAAGGTCAGGGCGAGCCCGGGCGCATCCTCGAAGCGAGCAAGACCGGGCTGACGGTTGCCTGTGGCAGCGGTGCCCTGC GCCTGACCCGCCTGCAGCTGCCCGGTGGCAAGCCGCTTGGCTTCGGCGACCTGTACAACAGCCGCCGTGAGCAGTTCGCCCCCGGCCTGGTTCTCGGCCA
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DNA Sequence for Gene |
>TK79_RS17785
ATGAATCCGCGCCTGGCGGCGGCCCGTGCGCTGAGCGTCGTGCTGTCGGGCAAGGCGTCTCTGGGTAGCAGCCTGCCGGAGGTCCTCGGCAAGGTGGACG CCCGTGATCGCGGTCTGACCCAGGAACTGGCCTTTGGTACCGCGCGCTGGCAGCCGCGCCTGGCGGGGCTGGCCAACCAACTGTTGCAGAAGCCGTTCAA GGCCGCCGACCGCGATGTCGAAGCATTGCTGCTGGTCGGCCTCTATCAGCTGCTGCATACCCGTATTCCGGCCCATGCCGCCATCGGCGAAACCGTCGGC TGCGTGGACAAGCTGAAGAAGCCCTGGGCCAAGGGGCTGCTCAATGCCGTGCTGCGCCGCGCCCAGCGCGAAGGTGAAGCACTGCTGGCCGAACTGGAAC ACGATCCGGTGATTCGCGTGGCCCACCCGCGCTGGCTGCAGAAGGCCCTCAAGGCACACTGGCCCGAACACTGGGAAGCCATCTGCGTGGCGAACAATGC GCATCCGCCGATGATGCTGCGGGTCAATCGCCGTCAGACCAGTCGAGACGTCTACCTGACCGAGCTGCAAACCGCCGGTATCGACGCCTTCTCCTGCGAA TTCAGCGAAGACGGCATCCGACTCGCCAGCCCCTGCGATGTGCAGCAGCTGCCCGGCTTCGCCGAAGGACGGGTCAGCGTGCAGGACGAAGCCGCGCAGC TGGCCGCCGGGCTGCTCGATCTGGCGCCCGGCCAGCGCGTGCTGGACGCCTGCTGCGCTCCGGGCGGCAAGACCTGCCACCTGCTCGAGCGCGAGCCGCA GCTGGCCGGGCTGGTTGCGCTGGACCTCGAGCCCAAGCGCCTGGCGCGGGTACGGGAGAATCTCGAGCGTCTGCAGCTCGATGCCGAGCTGCTCGCCGCC GATGCGCGCGCCACCGCGCAGTGGTGGGATGGCAAACCGTTCCAGCGCATCCTGCTCGACGCACCCTGCTCGGCCACCGGCGTGATCCGCCGCCATCCGG ACATCAAGCTGACCCGCCAGGCCGAGGACATCGCTCCACTGGCCGCACTGCAGGGCGAGATGCTCGATGCACTGTGGCCGACCCTGGAAGTCGGCGGCGT GCTGCTCTATGCCACCTGCTCGGTGCTGCCGACCGAGAACCGTGAGGTGATCGGTGCCTTTCTCGCACGCACCCCCGGCGCGCGCGAACTGGACCTGCCG GCCGGCTTCGGCCTGACGCAGCCCCACGGTCGCCAGCTGCTGCCGCAGCAGAACGGCCACGACGGCTTCTACTATGCCAAGCTGATCAAGATCGCAGCTC AACCGCGTGGCCATCATCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGAACCCGGGCCGGCCAGGCTCGACCCCAACATGGACGCGGCAGCGGATGGCTGCCGCTCAGGAGTGACCGCGTGAAGATCATCATCCTCGGTGCCGG TCAGGTCGGCGGCACCCTCGCCGAACACCTCGCCAGCGAAGCCAACGACATCACCGTGGTGGACACCGACGGCGATCGCCTGCGCGATCTCGGCGACCGC CTGGACATCCGCACCATTCAAGGCCGCGGCTCGTTTCCCACCGTGCTGCGCCAGGCCGGCGCCGACGACGCCGACATGCTGGTGGCGGTGACCAACAGCG ACGAAACCAACATGGTCGCCTGCCAGGTCGCCTACACGCTGTTTCACACGCCGACCAAGATCGCCCGGGTGCGCGAGGCGGCCTATCTGGTGCGCTCGGG TCTGTTCAACAACGAAGCCATTCCGGTGGACGTGCTGATCAGCCCGGAACAGGTGGTGACCAATTACATCAAACGCCTGATCGAGCATCCCGGCTCGCTG
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Amino Acid Sequence |
>16S rRNA methyltransferase
MNPRLAAARALSVVLSGKASLGSSLPEVLGKVDARDRGLTQELAFGTARWQPRLAGLANQLLQKPFKAADRDVEALLLVGLYQLLHTRIPAHAAIGETVG CVDKLKKPWAKGLLNAVLRRAQREGEALLAELEHDPVIRVAHPRWLQKALKAHWPEHWEAICVANNAHPPMMLRVNRRQTSRDVYLTELQTAGIDAFSCE FSEDGIRLASPCDVQQLPGFAEGRVSVQDEAAQLAAGLLDLAPGQRVLDACCAPGGKTCHLLEREPQLAGLVALDLEPKRLARVRENLERLQLDAELLAA DARATAQWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQAEDIAPLAALQGEMLDALWPTLEVGGVLLYATCSVLPTENREVIGAFLARTPGARELDLP AGFGLTQPHGRQLLPQQNGHDGFYYAKLIKIAAQPRGHHQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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