Pseudomonas stutzeri NT0124, TK79_RS17390
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0124 215_97902_13087117_182135183, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCTTCGGCAGCAGATGCTGCATCGGTTCTACGCTGATCACCACGGCTGGTTGAATGGCTGGCTGCGCCGTCAGCTCGGCTGTAGTCAGCGTGCGGCCG ACCTCGCGCAGGACACCTTCGTGCGGGTGCTGAGCAAAGACGACGACATGGCCGCGATCCGCGAACCCCGGGCCTATCTGCACACCATCGCCAAGGGCCT GTTGATCAACCATTGGCGCCGCCGACAGATCGAGCAGGCCTATCTGGATGCATTGGCACTGCAACCGGAGCCGGTGGCACCGTCGCCGGAGTCCCAGGCG CTGATCGTCGAAACCCTGCTGCGGATCGATGCCATGCTGGCGCAGCTGCCCACCAGGGTGCGCAGCGCTTTCCTCATGTCGCAGCTGCACGGCATGACCT ACGCGGCTATCGCCACCGAACTGGGCGTATCCGAGCGCATGGTGAAGAAGTACATGGCGCAGGCCATGCTGCATTGCCTGATGCTGGTAACGGAGGACTG
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| DNA Sequence for Gene |
>TK79_RS17390
ATGGGCAGCGACTACCGCGTGTTGCAGCAGGCTGCCGAATGGTTCGCCCTGCTGCAGTCCGGCTCGGTCAGCGCCAGCGAGCGCCGCGCGTGGGCGGCAT GGCTGGAGCAGCCGGAACACGCCCAGGCGTGGGCGAAGGTCGAGCGCATCAGCGGCCAGTTCCAGCCGCTGACCAGTGATGCCATCGGCCGAGCCGCCGG GGCCATGCTGCAGCAACGGCAGTCGACCCGGCGGCAGGCGTTGAAGGTGCTCTCGGTGCTCTGCGGTGGCGCAGTCCTGACCGTCGCCGGCGGTGCGCTG CCCTGGCAGCGTTGGGCGGCCGATGAGCGCACCGCCGTCGGTGAAGTTCGTGATCTGCGCCTGGCCGATGGCACCCGGTTATGGCTGAACACCGACTCGG CGCTGGATATCCGCTTCGACGCGAAGGAGCGGAGGCTGGCGCTGCAGCATGGCGAACTGCTGATCGACGCGCCCGCCAGCCGGCGCGGACGACCGTTGGT GTTGAGCAGTCGCGAGGGGCATGTGCGCAGCGAGCAAGCCGCGCGCTTTTCGCTGCGCCAGGAAGAAGGGCGCACGCGTCTCAGCGTGTTCGCTGGCGTC GTGGACATTCAACTCGAGGGTTTCGGCGTGACCAGCGTGCCTGCCGGCCAGCAGGCTGCGTTCGACCGTCGCCATGTCGGGCCGCTGGCTGCTGCGCGCG CCGAGCACCAGGCTTGGGCGACCGGGGTGCTGCTGGCCGACAACCAGCGTCTCGAGGACTTCCTCGCCGAACTGTCGCGCTATCGCCACGGCTACCTCGG TTGCGATCCACGGATCGCCGATCTGCGTGTGGTCGGGGCGTTCCCGCTGGCCGATACCGACCGTGTACTGCAAGCCCTTGCCGCTACGTTGCCTGTGCGC ATCGAGCGGCGCATGGCCTGGTGGGTCAGCCTGGAACCGTTGCCCAAGCAGGCAGGTGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAACGCTTACGCGAATAAAAAATATTCGCATCTGCAGTTCCCTTTCCGGATTCTCGCCGGGCATAGGACGAAACCCGTCATTCGAACAGGACTTCCCA TGCGCTCGACCGCCTTGCCCTTCCTTCCCGACCGTTCCCGTGCCCTGGCGCTGGGTATCCGCGCCGCGCTGCTGTGCCTGCCCCTGAGCATCGCTCCCGG CCTGGCCAACGCCCAGTCGACGACCCAGCAGGCGGTGCGCAGCTACGACATCCCCGCTGGCCCGCTGTCCAGCGCACTGAGCCGCTTCGCCGGCGAGGCC GGGGTGCTGCTATCGGTGGACGGCAGCTTGCTGCAAGGCCTGGAAACGAACGGGCTGCGCGGCCAGTACGGCGTCGACGACGGTTTTGCCGCACTGCTGC AGGGCAGCGGCCTGCAAGCCGTGCGCGACGGCCAGGGCAACTACTCGCTGAGCCGCCGTACGGCACAGAGCGATGCCGTCGAGCTGCAATCGATGACCGT
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| Amino Acid Sequence |
>membrane protein
MGSDYRVLQQAAEWFALLQSGSVSASERRAWAAWLEQPEHAQAWAKVERISGQFQPLTSDAIGRAAGAMLQQRQSTRRQALKVLSVLCGGAVLTVAGGAL PWQRWAADERTAVGEVRDLRLADGTRLWLNTDSALDIRFDAKERRLALQHGELLIDAPASRRGRPLVLSSREGHVRSEQAARFSLRQEEGRTRLSVFAGV VDIQLEGFGVTSVPAGQQAAFDRRHVGPLAAARAEHQAWATGVLLADNQRLEDFLAELSRYRHGYLGCDPRIADLRVVGAFPLADTDRVLQALAATLPVR IERRMAWWVSLEPLPKQAGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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