Pseudomonas stutzeri NT0124, TK79_RS16675

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046983 protein dimerization activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 - - - 123 218 4.4E-40
CDD cd16917 HATPase_UhpB-NarQ-NarX-like - - 702 787 1.01608E-33
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 38 259 8.5E-18
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 326 440 5.6E-11
CDD cd00130 PAS IPR000014 PAS domain 339 430 0.00219405
Gene3D G3DSA:1.20.5.1930 - - - 563 652 2.8E-11
SMART SM00086 pac_2 IPR001610 PAC motif 393 433 0.037
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 733 747 1.8E-6
Coils Coil Coil - - 433 453 -
CDD cd01007 PBP2_BvgS_HisK_like - - 36 256 1.24043E-47
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 40 257 2.1E-30
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 441 572 5.5E-11
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 699 790 8.4E-10
Gene3D G3DSA:3.30.450.20 PAS domain - - 317 446 5.8E-19
CDD cd00130 PAS IPR000014 PAS domain 455 562 3.27958E-8
Gene3D G3DSA:3.30.450.20 PAS domain - - 447 562 5.6E-18
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 661 790 1.2E-31
Pfam PF08448 PAS fold IPR013656 PAS fold-4 326 435 6.6E-7
Gene3D G3DSA:3.40.190.10 - - - 30 255 4.4E-40
Pfam PF07730 Histidine kinase IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain 593 659 4.9E-13
Coils Coil Coil - - 565 592 -
SMART SM00086 pac_2 IPR001610 PAC motif 524 565 17.0
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 430 563 1.19E-20
Pfam PF08447 PAS fold IPR013655 PAS fold-3 473 554 2.9E-13
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 697 791 4.3E-12
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 332 442 4.51E-19
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 775 788 1.8E-6
PANTHER PTHR24421 NITRATE/NITRITE SENSOR PROTEIN NARX-RELATED - - 241 790 2.5E-63
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 665 789 1.7E-21
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 40 257 6.2E-19
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 751 769 1.8E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.