Pseudomonas stutzeri NT0124, TK79_RS16295
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0124 213_245251_34463485_17839, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCTGGGCATCGAGCTCGATGAAATATCCACGTCGCGGGTGGTGATGCACCTGCCAATGAAGCCCGAGCTGGTCGGCAACTTCGTCCATGGCATCCTCCA CGGCGGCGTGATCGCCTCGTTGCTCGACGTCGCCGGTGGCGCCATGGCGATGCTGGGCGCCTTCGACAAGCATCGTCACCTGACCATGCAGGAACGCGCC GCCCGCCTGTCCCGCCTCGGCACCATCGACCTGCGCATCGACTATCTGCGCCCCGGCCGCGGTACGCGCTTCACTGCCAGCGCGACCCTGCTGCGCTCGG GCAACAAGGTCGCGGTGGTGCGTTCGGAGCTGCACAACGAATCGGACACGCTGATCGCCGTGGGCACCGGCACTTATCTTTGCGGCTGAACGGCCGATAG GAGATTGGCGGCCGGGGTGCGCTCTCGTACACTCTGCCGAACATGGCCATGAGCCATCATCTCCACGAGGCAGGACGCCCGACAGTTCGAGTGCCGCCGC
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| DNA Sequence for Gene |
>TK79_RS16295
GTGTCCAGACTGCTGTTTTCCGACCTGCCCCCCGACCAGGTTGCCCTGCTCGGGCATAGCCATGACCCGATGCTGGTCGTGCTCTCCTATCTGATCGCCA GCGCCGCGGCCTTCACCGCCCTGGCCCTGGCCAAGCGGGTCAGCCGCAGCAGCAGCCCGCGCGGGCGCGAGCTATGGCGCTGGGTCGGCGCCTTCGCCCT GGGAGGCGGTATCTGGTCGATGCATTTCATCGGCATGCTGGCCTTCCGCGCGCCGCTGGACATTCGCTACGAGCACGGCATCACCGCCCTTTCGCTACTG ATCGCCGTGGCGGTGTCCTACGTGGTGATGCGCGTGCTCGGCCGCGATCACCTGAGCGTGGCGCAGTATGCCCTGGCCGGAACCGCTGCCGGCATCGGCA TTGCGGCGATGCACTACACCGGGATGGCCGCGATCCGTTCGCTGGCCACGCTGTACTACGCGCCGCTGGCGTTTGCCGCCTCGGTGCTGATTGCCATTGG CGCTTCCATCGCCGCGCTGGTACTGGCCTTTCATTTTCGCACCAGCCAGAGCCGCCATCAGCGCTGGCAGCGCCTGCTATGCAGCCTGGTGATGGGTGCG GCAATCGTCTCCATGCACTACACCGGAATGCACGCGCTGACCCTGGCCGTCCCCGCCGGTCTCGTGGAGCACGCCGCGCCATTCGGCAGCCACACCGGCC AGGGCGCACTCGCCTCGGCGATCGGCTTGGTAGCCCTGCTGGTGATCGTCACCGGCATCGCTGCGAGCTGGGCCGAACAGCGCTTCAGCGAGCAGCGCGA GGCGCTCGATCTGGCCGAGCACCAGCTCAACGCCATGACCCACTACGACCCGCTGACCAACCTTTTCAACGGCCGCGCTTTCACCGAGATGGTCACCCAG GTGCTGGCCGCACGCGAGGAGCGCCAGGCCCTGGCGGTGCTGGTGGTGGACCTGGACAACTTCAAGCGCATCAACGACAGCCTCGGCCACCGCAGCGGCG ACCTGGCACTGCAACAGGCGGCGCAGCGCATTCGCGCGGTGCTCGGTCAGCACGACATGCTGGCGCGCTTCTCCGGCGACGAGTTCTGCGTGCTCACCCT GGGCGCCTGGGAGCATGCCCAGGCGACCGCCGAGCGGATCCTCGACCAGCTGCGCCCGCCGTTCGTTCTGGGCGACACCCAACTGCGCCTGACAGCCAGC ATCGGCATCAGCCAGTACCCTGACGACGGCCTCAACTTCGATGCCCTGTTCCGTCACGCCGGCCTGGCCGTCGGGCAGTGCAAGGCCAGCGGCCGCAACC GCAGCCTGCGCTTCAATCCGGCACTGGAACTGCGCGCCCAGGAGGACCTGTCGCTGGAGCAGGACCTGCGCCGAGCGCTGAACGAGAACCTGCTCAGCGT GCACTACCAGCCCATCGTCGACGGCCGCAGCGGGCGCCCGGTAAGCCTCGAAGCGCTGGTGCGCTGGCAGCATCCGCAGCAGGGGTTCATCAGTCCGGAG CGTTTCGTCGGGCTGGCCGAACAGCATGGCTTCGTCGCCGAGCTGGACACCTGGGTGGCGCGCCGCGCCTGCGCCGACCTGGTCGGGCTGCTGGCGGAAG GCCATGATCTGCGCATGGCGGTCAACTGCTCGGCGCTCAACCTGTCCAACCCGCAGATGCCCGCGGTGGTTGCGCGGATCCTCGAACGCACGGGGCTGGA GCCCGCGCGACTGACCGTGGAAGTCACCGAGAACGCCCTGATGAACAGCCTCGGCGCGGCGATCCGCACGCTGGACGCGGTGCGCGAGCTGGGCGTGAAG GTTTCGATCGATGACTTCGGCAGCGGCTATTCCTCGCTGACCTACCTGCGTCAGCTGCCGGTCGATACGCTCAAGGTCGACCGTGCGTTCGTTCGGGAAA TTGCCGAGCAGGCCAACGACCGCGCCATCACCGCGGCGATCATCGCCATGGCGCACAAGCTGGGTTTGAAGGTGGTGGCCGAAGGGGTGGAAGAGGCAGT GCAGCTCGATTATCTGCGCGAAAACGGCTGCGACTTCATCCAGGGTTACTACTACAGCCGGCCGCTACCGTTACCGGCGCTGCGCGACTGGCTGGCCGAG CGGCCACTCACTGCGACCGTGACAACCGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGTCGGTCCAGCGCATTGGCGAACGCCTGACGGTCACGCTCGCCGTAAACCGCCTGGCCGCCACCCACCTGCCCCTGATCCCGCAGATCGGTGAACAG GTTGCGCACTGCCAGGCGCTCGCCCATGTTGCGCTCGTCGAACTCGCGCCCGCGCGGGTCGAGCGCGGCGACCCCCTTCTTCACCAGCCGGTCGGCCAGT GGCACGTCGCTGCAGATCACCAGGTCACCGGGCTCGGCATGCTCGACCAGATAGTCGTCCGCGGCATCCGGCCCGCTCGGCACGACGATCAGGCGCACGC AGGCGAACGCCGGCTTGACCTGGCTCTGCCCGGCGACCAGCAGCACCTCGAACTTGCGTTTGAGGGCGAACTTGATCACCTGATCCTTGGCTGCGCGCGG GCAGGCATCGGCGTCGATCCATACGCGCATCGGAACCGCCTCGCTCATGCCGCGGCGCGCCGAACAGTCGCCAGCAGGGCCGCCGCCCCGGCGAACATGG
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| Amino Acid Sequence |
>diguanylate cyclase
MSRLLFSDLPPDQVALLGHSHDPMLVVLSYLIASAAAFTALALAKRVSRSSSPRGRELWRWVGAFALGGGIWSMHFIGMLAFRAPLDIRYEHGITALSLL IAVAVSYVVMRVLGRDHLSVAQYALAGTAAGIGIAAMHYTGMAAIRSLATLYYAPLAFAASVLIAIGASIAALVLAFHFRTSQSRHQRWQRLLCSLVMGA AIVSMHYTGMHALTLAVPAGLVEHAAPFGSHTGQGALASAIGLVALLVIVTGIAASWAEQRFSEQREALDLAEHQLNAMTHYDPLTNLFNGRAFTEMVTQ VLAAREERQALAVLVVDLDNFKRINDSLGHRSGDLALQQAAQRIRAVLGQHDMLARFSGDEFCVLTLGAWEHAQATAERILDQLRPPFVLGDTQLRLTAS IGISQYPDDGLNFDALFRHAGLAVGQCKASGRNRSLRFNPALELRAQEDLSLEQDLRRALNENLLSVHYQPIVDGRSGRPVSLEALVRWQHPQQGFISPE RFVGLAEQHGFVAELDTWVARRACADLVGLLAEGHDLRMAVNCSALNLSNPQMPAVVARILERTGLEPARLTVEVTENALMNSLGAAIRTLDAVRELGVK VSIDDFGSGYSSLTYLRQLPVDTLKVDRAFVREIAEQANDRAITAAIIAMAHKLGLKVVAEGVEEAVQLDYLRENGCDFIQGYYYSRPLPLPALRDWLAE RPLTATVTTA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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