Pseudomonas stutzeri NT0124, TK79_RS15895
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0124 213_245251_34463485_17839, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGCAGCAGGCCCAGCAGCAGCGCCATGCGCGCCTGCTCAACGAGTTGCTGGCCTAAGCCGGCACGGCGCTACCGCCTGAGAAACAGCGCTTCCATTACG GCTGGTGATTTTTTAGACTACTCCGTCCGCTCGCCCATCCGGGCATGCTCTACCGTTACTGATCACGAGGAACACCATGGCCCGCGTTACCGTTGAAGAC TGCCTGGACAACGTTGATAACCGCTTCGAGCTGGTCATGCTTGCCACCAAGCGCGCACGTCAACTGGCGACCGGCGGCAAGGAGCCGAAAGTGGCCTGGG AAAACGACAAGCCGACCGTTGTCGCGCTGCGCGAGATCGCTTCCGGCCTGGTCGACTACGATGTCATTGCTCAGGACGAAATCGTTGACGATGAACCGCT CTTCACCCAGTACGAGGAAGAGCCGAACGAGGCCATCTGATTAAATGCCAGGTCGAAGTCGAACCGAGAAGATCGAAGTCAGCCGGCAGGGAGTACGACC
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| DNA Sequence for Gene |
>TK79_RS15895
TTGCCAGCCATAGACGCACTCGCGGATCGCCTGTCGACCTATCTCGGCCCGGACCAGGTCAACCTGGTTCGCCGAGCCTATTTCTATGCCGAGCAGGCCC ATGACGGGCAGCGCCGGCGCAGCGGTGAAGCCTACGTCACCCATCCCCTCGCGGTAGCCAATATCCTCGCCGACATGCACATGGACCATCAGAGCCTGAT GGCCGCGATGCTGCACGACGTCATCGAGGATACCGGCATTCCCAAGGAAGCTCTGGTCGCCCAGTTCGGCGAAACCGTCGCCGAGCTGGTCGATGGGGTC AGCAAGCTGACCCAGATGAACTTCGAGACCAAGGCCGAGGCCCAGGCCGAGAATTTCCAGAAGATGGCCATGGCCATGGCCCGCGACATCCGAGTGATCC TGGTCAAGCTCGCCGACCGCCTGCACAACATGCGCACCCTGGAGGTGCTGGCCGGCGAGAAACGCCGGCGCATCGCCAAGGAAACCCTGGAAATCTACGC ACCGATCGCCAATCGCCTCGGTATGCACACGATGCGCGTGGAGTTCGAGGACCTCGGCTTCAAAGCCATGCACCCGATGCGCTCCGAGCGTATCCGCGCC GCGGTGCGCCGCGCTCGCGGCAACCGCAACGAGATCGTCGAGAAGATCGAGCAGTCGCTGATTCACTGCCTCGAGCGCGATGGTCTGGAAGGCGAGGTGC TGGGTCGCGAGAAGCACCTGTACAGCATCTACAAGAAGATGCGCGGCAAGCGCAAGGCGTTCCACGAGATCATGGACGTCTATGCCTTCCGCATCGTGGT GGACAAGGTCGATACCTGCTACCGCGTGCTCGGCGCGGTGCACAGCCTGTACAAGCCGCTGCCAGGGCGATTCAAGGACTACATCGCGATCCCCAAGGCC AACGGTTACCAGTCGCTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAGATCCAGATCCGCACCCGCGAAATGGAAGAGATGGCCAACAACG GCATCGCCGCGCACTGGCTGTACAAATCCAACGAGGATGAAGTGCCCAAGGGCACCCACGCCCGCGCACGGCAATGGGTCAAGGGCGTGCTGGAGCTGCA GCAGCGCGCCGGCAACTCGCTGGAATTCATCGAGAGCGTCAAGATCGACCTGTTCCCGGACGAGGTCTACGTCTTCACGCCCAAGGGCCGCATCATGGAA CTGCCCAAGGGTTCCACCGCGGTCGACTTCGCCTACGCGGTGCACACCGATGTCGGCAACACCTGCATCGCCTGCCGCGTCAACCGTCGCCTGGCGCCGC TGTCGCAACCGCTGGAAAGCGGCTCGACGGTGGAGATCGTCACCGCACCGGGGGCTCGGCCGAACCCGGCGTGGCTGAATTTCGTCGTCACCGGCAAGGC GCGCACACACATTCGCCATGCGCTCAAGCTGCAGCGCCGCTCGGAGTCCATCAATCTCGGCGAGCGGCTGCTGAGCAAGGCCCTCAGCGGTTTCGAGACG AGCCTGGACAAGATCAGCCCCGAGCGCATCCAGCAGGTGCTTGCCGAATACCACATGGAATACGTCGAGGACCTGCTGGAAGACATTGGCCTGGGCAACC GCATGGCCTATGTCATCGCCCGGCGTCTGATTGCCCGGGACGACGAACAGGCACCAGCGCTCGAAGGGCCGCTGGCGATCCGTGGCACCGAAGGGTTGGT ACTCAACTACGCCAAGTGCTGCACACCGATCCCCGGCGACCCCATCGTCGGGCACCTGTCGGCCGGCAAGGGCATGGTGGTACACCTGGAAACCTGCCGG AACATCGCCGACGTCCGCCACAATCCGGACAAGTGCATCCAGCTGTCCTGGTCCAAGGACGTCACCGGCGAGTTCAACGTCGAACTGCGCGTCGAACTGG AGCACCAGCGCGGCCTGATCGCCCTGCTCGCCGGCAGCGTCAATGCCGCCGACGGCAATATCGAGAAGATCGGCATGGACGAGCGCGACGGCCGCATCAG CGTGGTCCAGCTGGTGGTCAGTGTGCATGACCGCGTGCATCTGGCCCGCGTGATCAAGAAGCTGCGCACCATCAAGGGCGTCACCCGCATCACCCGCGTC AAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGCCTACCCCGCTCACGGCGGTGGTGCTGTCGCCCCGCCGCGCCCCACCTGCCGACCCTGATACTTGTCCACTCAGACGACTGCCGCGGGTGGCCGCTG CCGGCATCAGCCATTATGCTGGCTGCCCGTTGCCCAATTCCCAGAGGAGTTTCCATGAGCAAGACCGTGATCAACACCGACAAGGCCCCGGCCGCCATCG GCACCTACTCCCAGGCCATCAAGGCCGGCAACACCGTCTATCTGTCCGGGCAGATCCCGCTGGACCCCAAGACCATGGAGCTGGTGGAAGGCTTCGAGGC GCAGGCCGTGCAGGTGTTCGAGAACCTCAAGGCGGTGGCCGAAGCGGCTGGCGGCTCGCTGAAGGACATTGCCAAGCTCAACATTTTCCTCACCGACCTC GGCAACTTCGCCACCGTCAACGAGGTGATGAGTCGTTACTGCCAGCAGCCTTATCCGGCGCGCGCCGCCATTGGCGTTGCTGCGCTGCCGAAAGGCGCGC
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| Amino Acid Sequence |
>bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
MPAIDALADRLSTYLGPDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIPKEALVAQFGETVAELVDGV SKLTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLAGEKRRRIAKETLEIYAPIANRLGMHTMRVEFEDLGFKAMHPMRSERIRA AVRRARGNRNEIVEKIEQSLIHCLERDGLEGEVLGREKHLYSIYKKMRGKRKAFHEIMDVYAFRIVVDKVDTCYRVLGAVHSLYKPLPGRFKDYIAIPKA NGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSNEDEVPKGTHARARQWVKGVLELQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIME LPKGSTAVDFAYAVHTDVGNTCIACRVNRRLAPLSQPLESGSTVEIVTAPGARPNPAWLNFVVTGKARTHIRHALKLQRRSESINLGERLLSKALSGFET SLDKISPERIQQVLAEYHMEYVEDLLEDIGLGNRMAYVIARRLIARDDEQAPALEGPLAIRGTEGLVLNYAKCCTPIPGDPIVGHLSAGKGMVVHLETCR NIADVRHNPDKCIQLSWSKDVTGEFNVELRVELEHQRGLIALLAGSVNAADGNIEKIGMDERDGRISVVQLVVSVHDRVHLARVIKKLRTIKGVTRITRV KA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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