Strain | Pseudomonas stutzeri strain NT0124 212_460558_58553450_170_184, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATATAGGTGCTGGTGAGATTGGGGTTCTCGATCAACGTCTGGCGCGCGAGATTGATCAGCTCCTCGCGCCTGAGGTTGGCCATCGGCATGCCGTCATCAC CGGTCAGTGCGGTGAGCGTATGCACCCTGGCCAGGCTGGTGGCGATCTGCAGGGGCGCTTGCAGCTGTGCCTGGATGCGGTTGACCTGTGCCTGAGCCAG GGCGGTGACGCGCTGCTCCACCATGCCGTCGATCAGCGCGCGAATCCGCTCCTCGACCAGCGCCTGGCTGCGCACGCCCGACGCCAGTGCATAGAGCAAC AGCGCCGCGATGACGGTCAGGGTGCAGGCGCCGGCCAGTGCGGCGAAGGCGGTCTGGATGGATCGGAACATGGCGTTACTCCAGTTGCGCAGCGGATAGC CACCTTATCGGCAGGATTTGCGACAACTGCAGCGGGGCGGCCGGTTGCCTGCCCGATAGGCCCGATCTAGGATACGGCGCAGGTTTTCCGGAGAGACTCG
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DNA Sequence for Gene |
>TK79_RS15040
ATGTTCAAGCCGCGCACGTTATCCATGCTGATCGCCGCCACCGCGCTGGCCGGCTGTCAGGCCGTCAACACCACCAGCGGTGGGGCCGTGGGGGTCGACC GCAAGCAGTACATGTTCAGCATGCTGTCGACCGACCAGGTCAACCAGATGTATGCCCAGTCCTATCAGGAAACGCTCAGCGCTGCCGCAAGCAAGGGCGT GCTGGAAAAGAACACGGCGATTGCCAAGCGCGTCAATGGCATCGCCGAGCGGCTGATCGCCAAGGTCGGCGTGTTCCGCCCGGATGCCGCACAGTGGGCC TGGGAAGTGAATGTCATCGACAGCCCCGAGCTGAATGCCAACTGCGGCCCGGGCGGCAAGATCATCTTCTATACCGGGTTGATCGAGAAGCTGAAGCTCA CCGACGACGAGATCGCCGCGGTGATGGGCCACGAGATCGCCCACGCGCTGCGTGAGCACGGACGCGAGGCGATGTCCAAGGCCTACGGCGTGCAGATGGC CACCCAACTGGGCTCGGCGATGGGTGTCGGCACTGGCGGACTGCAGCTGGCGAACATGGGCGTCGAGTACCTGATGACGCTGCCCAACAGCCGTGGCAAC GAGAATGAAGCCGACCTGATCGGCCTGGAGCTGGCCGCCCGCGCCGGTTACAACCCGAACGCGGCGATCACGCTGTGGGAAAAGATGGCCTCGGCCGGTG GTTCGGCTCCGCCTGAGTTCATGAGCACCCACCCGTCCTCGGCGACTCGCACGGCGGCGCTGCGTGCCAACATCCCGAAGGTGATGCCGCTCTACGAGCA GGCTCGCGGCGGCCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGAAGATGGTCGCCGACCGCTCAGGTCGGCGACAGTAGGGTCGAGAGAGGCGTTTCGATACCCAGCTGCTGGTGCACACCCTCGAGATCGATGAGGGTGT TGACCTCCTCGATGTCGCCGGCCGGATTGAGCGTCCAGACGCTCATGGCGGCGATGGCGAGGATCTTGTCGGTGACCGAACAGCCAAACAGGGGCGTGGC CAGCGTACCCATCACCGTGCTGGAGGTGACCACCTTGTGGCCCTCGCAGATGCACTCATCCACCACCACTTCCAGGTCCGGCATGGCCGCACGCACGTTG CGCACGAGTTCGGCGAAGCCTGCGCTGTTCAGCGGCTGGCTGATGAATGAGCCCTTGTAGGCGAAATACTTGCTCTGCATCTGTTCGGAAAGGGCCAGGC GGCCCTTGTTCCAGCTCAGATCGATATGGTTGCAGACTCGTTTCTTGCGTCCATCCGCTGACATGCAGCCGGTCTCCTCGGGGCGCTGGTGGTGCGCTGC
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Amino Acid Sequence |
>peptidase M48
MFKPRTLSMLIAATALAGCQAVNTTSGGAVGVDRKQYMFSMLSTDQVNQMYAQSYQETLSAAASKGVLEKNTAIAKRVNGIAERLIAKVGVFRPDAAQWA WEVNVIDSPELNANCGPGGKIIFYTGLIEKLKLTDDEIAAVMGHEIAHALREHGREAMSKAYGVQMATQLGSAMGVGTGGLQLANMGVEYLMTLPNSRGN ENEADLIGLELAARAGYNPNAAITLWEKMASAGGSAPPEFMSTHPSSATRTAALRANIPKVMPLYEQARGGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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