Strain | Pseudomonas stutzeri strain NT0124 211_430101_56647634_15539_, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTCGGGCAGCGCCTGCTGGAGATCTGGTCGGGCCTGCCGGTGCTCTACCTGCTGATCATTCTGGCCAGCTTCGTGCAGCCCAACTTCTGGTGGCTGCTG GGCATCATGCTGCTGTTCTCCTGGATGAGCCTGGTGGATGTAGTGCGTGCCGAATTCCTGCGCGGACGCAACCTGGAGTACGTGCGTGCCGCTCGCGCGC TGGGCATGCAGAACGGCGCGATCATGTTCCGCCACATCCTGCCCAACGCCATGGTCTCCACCATGACCTTCATGCCATTCATTCTCACCGGCGCCATCGG CACCCTCACCGCACTGGACTTCCTCGGTTTCGGCCTGCCGGCAGGCTCGCCGTCGCTGGGCGAGCTGGTCGCCCAGGGCAAGGCCAACCTGCAGGCGCCC TGGCTCGGCATCAGCGCCTTCATGGTGCTGGCGATAATGCTGACCCTGCTGGTGTTCATCGGGGAGGCGGCGCGCGATGCCTTCGACCCAAGGAAATAAG
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DNA Sequence for Gene |
>TK79_RS13090
ATGTCCGAAGTTTCGATTGGCGAGAACCTGGTCGAGGTCCGCGACCTGGCCGTCGAGTTCGTCACCGGCGATCAGGTCCAGCGCGTGGTAGAGGGTGTGT CCTTCGACATCCGCAAGGGCGAAACCCTGGCGCTGGTGGGCGAAAGCGGCTCGGGCAAGTCGGTCACCGCACATTCCATCCTGCGCCTGCTGCCCTACCC GCTGGCCCGCCACCCCCAGGGGGAGATTCATTTCCACGGGCAGGACCTGATCAAGTCGGACGAAAAAGCCATGCGCAAGATCCGTGGCAACCGTATCGCC ATGGTCTTCCAGGAGCCCATGACCTCGCTCAACCCGCTGCACACGGTGGGCAAGCAGATCAACGAGGTACTGGAAATCCACAAGGGCCTGCGCGGCAAGG CGGCCAGTGCCCGCACGCTGGAATTGCTCGAGCTGGTGGGCATACCGGAACCGCGCAAGCGCATCCGCGCCTACCCGCACGAACTGTCCGGCGGCCAGCG CCAGCGCGTGATGATCGCCATGGCCCTGGCCAACGAGCCGGAGCTGCTGATCGCCGATGAACCGACCACGGCGCTGGACGTTACCGTGCAGCTGAAGATC CTCGAACTGCTCAAGGAACTGCAGGCGCGGCTGGGCATGGCGTTGCTGCTGATCAGCCACGATCTCAACCTGGTTCGGCGGGTCGCCCATCGCGTATGTG TCATGCAGCGCGGTCGTGTCGTCGAACAGGCGTTGTGTGAAGAACTGTTCCGTTCGCCCAAGCATCCGTACACCCAGGAACTGCTCGCGGCCGAGCCCAG CGGTGGGCCGGTGGAGGTCGAGCAGGCGGCACCGCTGCTAGAGGTCGAGGATCTGCGCGTCTGGTTCCCGATCAAGAAGGGCCTGCTGCGGCGTACCGTC GATCACATCAAGGCCGTCGACGGCGTGAACTTCAGCCTGCCCCGGGGGCAGACGCTGGGGATCGTCGGCGAAAGCGGCTCGGGCAAGTCGACCCTGGGGT TGGCTATCCTTCGTCTGTTGGCCAGTCGCGGCGAGATCCGCTTCCAGGGTCAGCAGCTGCAGGGCATGTCGCAGCGCGCCGTGCGGCCGTTGCGCCGGCA GATGCAGGTGGTCTTCCAGGACCCCTACGGCAGCCTGAGCCCGCGGATGTCGGTCGGGCAGATCATCGGCGAAGGGCTGCGCATTCACCACATGGGTAAT GCGCAGGAGCAGGAACAGGCAATCATTGACGCGCTCGTGGAGGTTGGTCTCGATCCGGAAACCCGGCATCGCTACCCCCACGAGTTTTCCGGCGGGCAAC GGCAACGCATTGCCATTGCCCGGGCTCTGGTGTTGAAGCCGGCGCTGATACTGCTCGACGAGCCGACCTCGGCGCTCGATCGCACGGTACAGCGTCAGGT GGTGGAGCTCCTGCGCTCGTTGCAGGCCAAGTACAACCTGACCTACCTGTTCATCAGCCATGACCTGGCGGTGGTCAGGGCGCTGAGCCACCAGATGATG GTGGTCAAGCAGGGCCAGGTGGTGGAACAGGGGGCGGCTGCCGAGATATTCGCGGCACCGCAACATCCGTATACACAGCAGCTGCTGGAATCCGCCTTCA TGGCGCCCGGCGCTGCCGAACAACCAGAAGAGGGACAAGCACATGGGTTTTCTCACCGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCGTACTGATCGTCGGCGTTGCCAGCAAACTGTCGATTGCCTCGGGCATCGCCGCCGCCATGCATCGCGAAGGTGCAGAACTGGCTTTCACCTACCAG AACGACAAGCTCAAGGGCCGCGTCGAGGAATTCGCCGCCGGCTGGGGCTCGAGCCCGGAGCTGTGCTTCCCCTGCGACGTCGCCAATGACGAAGACATCG CCCGCGTGTTCGAGGAGCTGGGCAAGAAGTGGGACGGCCTGGACTGCATCGTCCACTCGGTCGGCTTCGCCCCGGGCGACCAGCTGAACGGCGACTTCAC CGAAGTCACCACCCGCGAAGGCTTCAAGATCGCCCACGACATCAGCGCCTACAGCTTCGTCGCCCTGGCCAAGGCCGGTCGCGAGATGATGAAGGGCCGC AACGGCAGCCTGCTCACGCTCTCCTACCTGGGCGCCGAGCGCACCATGCCGAACTACAATGTGATGGGCATGGCCAAGGCCAGCCTGGAAGCCGGTGTAC
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Amino Acid Sequence |
>microcin ABC transporter ATP-binding protein
MSEVSIGENLVEVRDLAVEFVTGDQVQRVVEGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPQGEIHFHGQDLIKSDEKAMRKIRGNRIA MVFQEPMTSLNPLHTVGKQINEVLEIHKGLRGKAASARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKI LELLKELQARLGMALLLISHDLNLVRRVAHRVCVMQRGRVVEQALCEELFRSPKHPYTQELLAAEPSGGPVEVEQAAPLLEVEDLRVWFPIKKGLLRRTV DHIKAVDGVNFSLPRGQTLGIVGESGSGKSTLGLAILRLLASRGEIRFQGQQLQGMSQRAVRPLRRQMQVVFQDPYGSLSPRMSVGQIIGEGLRIHHMGN AQEQEQAIIDALVEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVRALSHQMM VVKQGQVVEQGAAAEIFAAPQHPYTQQLLESAFMAPGAAEQPEEGQAHGFSHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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