Pseudomonas stutzeri NT0124, TK79_RS12685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri strain NT0124 211_430101_56647634_15539_, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCGTGCTGGGCATCCTCTACGAGAGCTACATCCATCCGCTGACCATCCTCTCCACCTTGCCCTCGGCCGGGGTAGGCGCCTTGCTGGCGATCATCCTTA CCGGCGACCAGTTCAGCCTGATCTCGCTGCTCGGGCTGTTCCTGCTGATCGGGGTGGTGAAGAAGAACGCGATCCTAATGATCGACCTGGCGTTGCAGTT CGAACGCCAGGACAAGCTGTCGCCCGCCGATTCGATCCATCGCGCCTGTCTGCTGCGGTTCCGACCGATCCTGATGACCACCATGGCGGCGATCCTCGGT GCGTTGCCGCTGCTGCTCGGCGGTGCGGAAGGGGCCGAGATGCGCCAGCCGCTGGGTCTGGCCATCATCGGCGGTCTGCTGCTGAGCCAGATCCTCACGC TCTACACCACGCCGGTGGTCTATCTGTACCTGGATCGTCTGCGCCACCGTTTCAACAGCTGGCGCGGTGTACGCACCGATGCCGCCCTGGAAAACTCGCT
DNA Sequence for Gene
>TK79_RS12685
ATGAACTCGTCGTCGTTGTACCCCTCATCGCTGAACCATGTCCTGCGCCCCCTGGCGGTAGCCATGCTCACGCTGTCGTTGGCAGCCTGCACGCTCGGCC CCGACTACCAGCGACCGGATCTGCCTGTGGCCAGCGAATTCAAGCAGGCCGAAGGCTGGAAACCCGCCACGCCGGCCGATGCGCTGCAACGGGGCGAGTG GTGGCGGCTGTACGGCGATGCCGAACTGGATGCGCTGGTGGCGCGGCTGAATGTCTCGAACCAGAACCTCGCCGCGGCCGAGGCGCAGTTTCGTCAGGCG AGGGCACTGGTTCGCGGGGCGCGCTCGCAGCTGTTTCCGATCCTCTCCGGCAACGCAGGCGTCACCCGCTCGGCGCAGGGTGGCAGCCGCTCGGATTCCA CCAGCGGAAGTTTTGCCAGTGGTGTCGGCGAAACCTACGAAGCGGGCCTGAGCGCATCCTGGGAGGCCGACATCTGGGGCCGGCTGCGGCGCAACCTCGA AGCCAATCGGGCGAACATGCAGGCCAGCGCGGCGGACCTTGCGGCGGCTCGCCTGAGCCTGCAGGCCGAGCTGGTGCAGACCTATCTGCAGCTGCGGGTG ATCGACGAGCACCAGCGGCTGCTCGACCAGACCGTTGAAGCCTATGCGCGCTCGCTGCGGCTGACCGAGAACCAGTACCGCGCCGGCATCGTGCCCCGGT CCGATGTCAGCCAGGCGCAGACGCAGCTCAAGAGTACCCAGGCGCAAGCCATCGACCTGAAGTGGCAGCGGGCGCAGATGGAGCATGCCATCGCAGTGCT GGTGGGCGTTGCGCCGTCGGAGCTGGAGATCGCCGTACGCGAGCACATCCCGGCGCTGCCCGATGTACCGCTGGCAGTGCCGTCCCAGTTGCTGGAACGG CGCCCCGACATTGCCTCGGCCGAGCGCCAGGTGATGGCCGCCAATGCCAACATCGGCGTGGCGGAAGCCGCCTGGTATCCGGACCTGACACTGTCGGCCA GCGGTGGCTATCGCAACAGCAGCTTCAGCGACCTGTTCAGCGTGCCGAACCGTTTCTGGTCGCTGGGGCCGCAACTGGCGCTGACCCTGCTCGACTTCGG TAGCCGTCGTGCGGAATTGGAGCGGGCCGAGGCCAGCTACGACCAGACGGTCGCCAATTACCGCCAGACCGTGCTCGACAGCTTCCGTGAAGTGGAGAAC TATCTGGTGCAGTTGCGCGTGCTGGAACAGGAGGCGGTGGTGCAGCGCGAAGCGCTGGAGGCCGCACAGGAGTCCCTGCGGCTGATCGAAAACCAGTACC GCGCAGGTACCGTCGACTTCCTCAGCGTGGCCACCGTGCAGACCACCGCGTTGAACAACGAGCGCACCAACCTGACCCTGCTGGGGGATCGCCTGACGGC CAGCGTCCTGCTGATCGCTGCACTGGGCGGCGGCTGGGACGCGCAGCAGCTGGAACAGGATCCACTGCTATCCACGGGCACTGGCAAACCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAGGCCACACAAAAAAGCCCCGCCAGCTGGCGGGGCTTTTTTCATCTGGATGTTCGTCAGTCGCGCTGCTTGCGGTTGACGGTCTCGGCGGCCTTGATG ATGTCCGCGCCGATCATCGGTTCGAACTCCTTCCAGACGGGGCGCATCGCTTCGCGCCAGCGCTCGCGCTCTTCCGGCGTCAGGGTGACGATCTCGGAGG TACCCGCCTTGCGAATCCGCTCGCGATCGGCCTGGTTCAGCTCCTCCGCCTCGCGGTTCACCATGAAGCTGACCTCGTCGAGAATCGCCTCCAGCTCGAA GCGGATCTTGTGCGGCATGCTCATCCAGAAGCGTGTGTTGCTCACCACCATGTAGTCCAGCACGCCATGGTCGGTTTCGATGATGTAGGGCTGCACAGTG TGCATTTTCTTGCTGTAGATATTCGACCAGGGGTTCTCCGCGCCCTGTACGGTGCCGGTGCGCAGCGCGTCGTAGACGTCGGCGAAGGCGATCTTCTGGG
Amino Acid Sequence
>RND transporter
MNSSSLYPSSLNHVLRPLAVAMLTLSLAACTLGPDYQRPDLPVASEFKQAEGWKPATPADALQRGEWWRLYGDAELDALVARLNVSNQNLAAAEAQFRQA RALVRGARSQLFPILSGNAGVTRSAQGGSRSDSTSGSFASGVGETYEAGLSASWEADIWGRLRRNLEANRANMQASAADLAAARLSLQAELVQTYLQLRV IDEHQRLLDQTVEAYARSLRLTENQYRAGIVPRSDVSQAQTQLKSTQAQAIDLKWQRAQMEHAIAVLVGVAPSELEIAVREHIPALPDVPLAVPSQLLER RPDIASAERQVMAANANIGVAEAAWYPDLTLSASGGYRNSSFSDLFSVPNRFWSLGPQLALTLLDFGSRRAELERAEASYDQTVANYRQTVLDSFREVEN YLVQLRVLEQEAVVQREALEAAQESLRLIENQYRAGTVDFLSVATVQTTALNNERTNLTLLGDRLTASVLLIAALGGGWDAQQLEQDPLLSTGTGKP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site