Pseudomonas stutzeri NT0124, TK79_RS11335 (hscA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0124 210_180034_21699032_14836_50, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCAACTCGCCGATCGCTATCGCGAGCTTGCGCGCCAGGTTCATCCGGATCGCTTCGCCGATGCTGGCGAAAGCGAGCAGCGCCAGGCGCTGGAGCGTTC GGCCAATCTGAACGAGGCCTATCAGACCCTGAAGAGCCCGAGCCGGCGTGCGCGCTATCTGCTGGCGTTGGAGGGGCACGATGTGCCGTTGGAGGCGACC GTTCAGGATCCTGCCTTCCTGATGCAGCAGATGCATTGGCGCGAAGAGCTCGAAGAGCTTCACGAGCAGGCCGATCTCGATGGTGTTGCGGCATTCAAGT CGCGGCTCAAGCAGGCTCAGCAAGGTCTCAACGACGACTTCGGTCAGATCTGGCAAGACCCCGCGCGCCGTGTGGATGCCGAAAGACTGGTTCGCCGCAT GCAGTTTCTCGACAAGTTGACCCAGGAAATGCGCCAGCTCGAAGAGCGCCTCGACGATTAACCCGCGCGACGCTCGCGTTGCGCCCGATACCAGACAGAC
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| DNA Sequence for Gene |
>TK79_RS11335
|hscA
ATGGCCTTACTTCAGATTGCCGAGCCCGGACAAAGCCCTCAGCCCCATCAGCGGCGCCTGGCTGTCGGAATAGACCTGGGCACTACCAACTCCCTCGTTG CCGCGTTGCGCAGTGGCGTCACCGCCCCGCTGGCCGATGCCGATGGGCAGGTGATTCTGCCGTCCGTTGTGCGTTATCACGCCGATCGTGTGGAGGTCGG TGCGTGTGCCAAGCGTGCAGCAGCTGCTGATCCGTTCAATACCATCAGCTCGGTCAAGCGGTTGATGGGGCGAGGGCTTGCGGACGTCAAGCAGTTGGGC GAACAGTTGCCCTATCGTTTCCGTCAGGCCGAATCGCAGATGCCCTTCATCGAGACGGTCCAGGGGGCCAAGAGCCCGGTGGAAATCTCGGCGGAGATCC TGCGGGCGCTGCGCGAGCGCGCCGAGGCGACGCTGGGTGGCGAGCTGGTCGGGGCGGTGATCACCGTGCCGGCCTACTTCGATGATGCCCAGCGTCAGGC GACCAAGGATGCGGCGCGGCTGGCCGGCCTCAATGTGCTGCGCCTGCTCAATGAGCCGACCGCAGCGGCGGTCGCCTACGGTCTGGACCGTCAGGCCGAG GGTGTCGTCGCGATCTACGATCTCGGCGGCGGAACCTTCGATATCTCCATTCTGCGTCTGACCAAGGGTGTGTTCGAGGTGCTGGCCACAGGCGGTGATA CTGCCTTGGGCGGTGACGATTTCGATCACGCTGTGGCTGACTGGATTCTCCAGCAGGCCGGGGTTTCCGAGGATCTGGCGCCCGGCGAGCAGCGCGAGCT GTTGAAGATCGCCTGCGATGCCAAGGAGCGCCTCAGTGTGGACGAGACGGTTCAGGTCGCCTACGCCGGTTGGGCGGGCGAGCTCCGCCGTGAGACGTTC GATGCTCTCATCGAGCCGCTGATTGCCCGAAGCCTCAGGTCGTGCCGGCGCGCGGTGCGTGATTCCGGTGTCGAGCTGGACGAGATCACGGCAGTGGTCA TGGTCGGCGGCTCGACCCGCGTGCCAAAAGTACGTTCGTCCGTGGGCCAGCTGTTCGGTCGGGAGCCGCTGACCGATATCGATCCGGACGAAGTGGTGGC GATCGGTGCCGCGATCCAGGCCGAGACCCTGGCGGGCAACAATCGGGACGGCGAAGAGCTGCTCCTGCTCGACGTGATCCCGCTGTCGCTGGGTCTGGAG ACCATGGGCGGGCTGATGGAGAAGATCATCCCGCGCAATACCACGATTCCGGTTGCACGTGCGCAGGACTTCACCACCTACAAGGATGGCCAGTCGGCCA TGATGATCCATGTGCTGCAAGGTGAGCGCGAGCTGATCTCCGACTGCCGTTCGCTGGCGCGCTTCGAGCTGCGTGGTATCCCGCCGATGGTTGCGGGCGC GGCGAAGATTCGCGTGACGTTCCAGGTCGATGCCGACGGACTGCTCAGCGTTTCGGCGCGCGAGTTGGCCTCCGGCGTCGAGGCCAGCATTCAGGTCAAG CCGTCCTATGGCCTGACCGATGGCGAGATCGCCAGGATGCTCGAGGACTCGTTCCGCAAGGCGGATCAGGATCGCGACGCTCGCGCTCTGCGCGAGCAGC TGGTCGATGCCCAGCGCTTGCTGGAGGCTGTCGAAGCAGCGCTGATTGCCGACGGGGAACGTCTGCTTTCCACCGAGGAGCGTGCCGCCATCGAGGCTCA GATGGCCGAGTTGCGTGCGTTGCTCGACAGTCAGGACGTGTCCGCCATCGAGCGCCAGACCAAACGCCTGAGCCAGATCACCGACGCCTTCGCTGCGCGT CGTCTGGATTCCACCGTCAAGGCCGCCTTGGCCGGGCGGCGGCTTAACGATATCGAGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCAGATGCCGCAGATCATTTTCCTGCCTAATGCCGATCATTGCCCCGAAGGTGCTGTGATCGAGGCGAAAACCGGCGAGACGGTGCTGGACGCCGCGCT GCGCAACGGCATCGATATCGAGCATGCCTGCGAGAAGTCCTGCGCATGCACCACCTGTCACGTGGTGGTTCGCGAGGGCTTCCAGTCGCTCGAGGCCTCC GATGAGCTGGAGGACGACATGCTCGACAAGGCCTGGGGGCTGGAGCCCAACTCGCGGCTGTCCTGTCAGGCGGTAGTGGCCGATACCGATCTAGTCGTGG AGATTCCGAAGTACACCATCAACCAGGTGTCGGAAGGGCATTGAGGGCAAGGACATGCAACTGAAATGGACTGATGTGCAGGACATCGCCATCGAACTCG CCGAGCGCAAGGCCGATGTCGATCCGCGCTATGTGAATTTCGTCGATCTGCATCGCTGGGTACTCGAACTGCCTGACTTCGCTGATGAGCCTGGTCGTGG
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| Amino Acid Sequence |
>chaperone protein HscA
MALLQIAEPGQSPQPHQRRLAVGIDLGTTNSLVAALRSGVTAPLADADGQVILPSVVRYHADRVEVGACAKRAAAADPFNTISSVKRLMGRGLADVKQLG EQLPYRFRQAESQMPFIETVQGAKSPVEISAEILRALRERAEATLGGELVGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAVAYGLDRQAE GVVAIYDLGGGTFDISILRLTKGVFEVLATGGDTALGGDDFDHAVADWILQQAGVSEDLAPGEQRELLKIACDAKERLSVDETVQVAYAGWAGELRRETF DALIEPLIARSLRSCRRAVRDSGVELDEITAVVMVGGSTRVPKVRSSVGQLFGREPLTDIDPDEVVAIGAAIQAETLAGNNRDGEELLLLDVIPLSLGLE TMGGLMEKIIPRNTTIPVARAQDFTTYKDGQSAMMIHVLQGERELISDCRSLARFELRGIPPMVAGAAKIRVTFQVDADGLLSVSARELASGVEASIQVK PSYGLTDGEIARMLEDSFRKADQDRDARALREQLVDAQRLLEAVEAALIADGERLLSTEERAAIEAQMAELRALLDSQDVSAIERQTKRLSQITDAFAAR RLDSTVKAALAGRRLNDIED
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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