Strain | Pseudomonas stutzeri strain NT0124 210_180034_21699032_14836_50, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAGGCTGGCATTATCCCTATGCATTCAGCTACAGCAAGCACAGACCGCCGAATGGATCACGAGTTCGGCGAGCCGACCTTCACCACCGACCGGAAGCTCT GCATGAATGACCACGCACCGCTGTTACCCCCCGGTGCCGATGCCGAAACGCGGCGCACCGCCGTTTACCTGGTGATGTCACAGATCCCGCCGGGCAAGGT GGTGAGCTACGGCGAGCTGGCCGCCATGGCCGGCCTCGGCCGCGCCGCGCGCTGGGTTGGCCGCCTGATGTCGCAGCTGCCGGATGACACCAGCCTGCCC TGGCACAGGGTGATCGCCGCCGGCGGCCGCCTCAGCCTGCCAGCCGGCACAGCGGCCGGGCACGAGCAACGCATGCGGCTGCGCGCCGAGGGCCTGACCA TCGTCAACGACCGCGTGGACATGCGTCGGCACGGCTGGCATTCGACGGAGCTCAACGGTTAGAGTGCGCCCTTCGTCCCATCAGCACAGAACCTTGATGT
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DNA Sequence for Gene |
>TK79_RS10765
ATGTCCCGTGATACCTGGCGCGATGCGCTAGCCGCCTACGCCAGTCCTGCCACGCTCGCCCTGTTGTTACTGGGGTTCGCAGCCGGTCTGCCGGCGGTCC TGGTGTTCTCCACCCTTTCGGTGTGGTTGCGCGAGGCGGGTGTTTCCCGGGAGACCATCGGCTTCGCCAGCTGGATCAGCCTGGCCTACGCCTTCAAATG GGTGTGGTCGCCGATGCTCGACCAGTGGCGATTGCCCTGGATCGGCTCGCTGGGCCGGAGACGTTCCTGGCTGGTGCTGTCCCAGGCGCTGATCGCCGTC GGCCTGATCGGCATGGCGCTGTGCAACCCGCAGCACAATCTCACCATGCTCATCGCCCTCGCCGTGGTGGTGGCGTTCTCATCGGCCACTCAGGACATCG CCATCGATGCCTACCGCCTGGAGATCGCCGAGGACAAGTTGCAGGCGACCCTTGCCGCCAGCTACATGACCGGTTACCGCATCGCCATGCTGCTGGCCAG CGCCGGTGCCCTGTTCCTCGCCGAATGGCTGGGCTCCAGCAACCTGAATTACGACCAGGCGGCATGGACCACCACCTACCTAGTCTTTGCCCTGCTCATC GTGCCAGGCCTGGTCACCAGCCTGGTGATCCGCGAGCCGGACGTCGCCGCGCCGCTACCCAACGAACCCTCGCGCTACACCTTCAATCATCAGCTGGCCG CGGTCGGGCTGCTGCTGGTGCTGCTGATCTCGGTGCCGGCGATGATCAACGCGCTGATCGCCCAGGCCTGGCCGCGCGCCACACTGTACGCACTGTTCAT TCTCGGCAGCGTATCGCCGGTGGGCCGCGCGCTGTTCGTCCCGGTGCGCCACATTCTCGGCCAGGCCAAGGCGCGCCAGCGGCCGACACGCTTCGACTTC GCCCACCAGGCGGTATCGGTGATCGTGCTGATCATCCTGATGGTTTCCACCACCGGCATGTTCCAGTCCTACTGGGGCGGCTACTGGCCGCGCGGCACCA TGTACCTCCTGATCTGCTGGGGCTGCCTGTCGGCGCCCGGGCGCATCCTGATGGGGCCGGTACTGACGCCGATCACCGACTTCATCGTGCGCTACCGCTG GCAGGCGCTGCTACTGCTCGGGCTGATTGCCACCTACCGGATGTCGGACACGGTGATGGGCGTGATGGCCAACGTCTTCTATATCGATCAGGGCTTCTCC AAGGACGAGATCGCCAGCGTCAGCAAGCTGTTCGGGCTGGTGATGACGCTGCTCGGCGCGGCCTTTGGCGGCCTGTTGATCGTGCGCTTCAGCATCCTGC CGATCCTGTTCATCGGCGGTGCGGCATCGGCCGCCACCAACCTGATGTTCATGCTGCTGGTGGAGATGGGCGCCAACCTGCAGATGCTGATCGTCACCAT CTCCTGCGACAACTTCAGTGGCGGTCTGGCCTCCACCGCGTTCGTCGCCTACCTGTCGAGCCTGACCAACCTGAAGTTCTCGGCGACCCAGTACGCGCTG CTCAGCTCGCTGATGCTGCTGCTTCCGCGCCTGCTCGGTGGGTATTCCGGCGTCATGGTGGAGCACCTGGGTTACAGCAACTTCTTCCTGGTCACCGCCC TGCTCGGCATACCGACGCTGGTATTGATCGCCTGGCAATGGACCCGAACTCGCCAGCAGCCGCTTGACGGCGAGGGCGAAGGCGCCTCGGAGCGCAGCTG A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAACGACGAAGCCGGCAGATGCCGGCTTCGCTTCGTTTGCAAAGGGTGATCAATGCTGCACGAGGTGCACCACGCGCTGCGGGAATGGAATCCCGACGCC CGCGGCGGTCAGGCGCTCCTTGGCCTGCTCGGTAAAGCTGAAGGTCACCGGCCAGAAGTCAGCGGTCGCCACCCAGACGCGCAACGACAGGTTCACCGAA CTGTCACCGAGCCCCGTCACGAATACCACCGGCTCGGGCTCGCGCAACACTCGCGGGTCCTCGGCGATCTCCAGCAGGATCTGGCGGGCCAGCTTGATGT CGCTGCTGTAATCGATGCCGATGTTGATATCGGCACGGCGGCGCGGCTCACGGGAAAAGTTGGTGATATGGCCATTGGAGAGCGCGCCGTTGGGCACCAC CACGGTCTTGTTGTCTCCGGTCTTGAGCACCGTATGAAAGATCTGGATGGAGTTGACGGTGCCCGCGATACCTTGCGCCTCGATCCACTCGCCAACGCGA
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Amino Acid Sequence |
>permease
MSRDTWRDALAAYASPATLALLLLGFAAGLPAVLVFSTLSVWLREAGVSRETIGFASWISLAYAFKWVWSPMLDQWRLPWIGSLGRRRSWLVLSQALIAV GLIGMALCNPQHNLTMLIALAVVVAFSSATQDIAIDAYRLEIAEDKLQATLAASYMTGYRIAMLLASAGALFLAEWLGSSNLNYDQAAWTTTYLVFALLI VPGLVTSLVIREPDVAAPLPNEPSRYTFNHQLAAVGLLLVLLISVPAMINALIAQAWPRATLYALFILGSVSPVGRALFVPVRHILGQAKARQRPTRFDF AHQAVSVIVLIILMVSTTGMFQSYWGGYWPRGTMYLLICWGCLSAPGRILMGPVLTPITDFIVRYRWQALLLLGLIATYRMSDTVMGVMANVFYIDQGFS KDEIASVSKLFGLVMTLLGAAFGGLLIVRFSILPILFIGGAASAATNLMFMLLVEMGANLQMLIVTISCDNFSGGLASTAFVAYLSSLTNLKFSATQYAL LSSLMLLLPRLLGGYSGVMVEHLGYSNFFLVTALLGIPTLVLIAWQWTRTRQQPLDGEGEGASERS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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