Pseudomonas stutzeri NT0124, TK79_RS10660

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019619 3,4-dihydroxybenzoate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02426
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48557
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.20.200.10:FF:000014 3-carboxy-cis,cis-muconate cycloisomerase - - 1 363 0.0
NCBIfam TIGR02426 JCVI: 3-carboxy-cis,cis-muconate cycloisomerase IPR012789 3-carboxy-cis,cis-muconate cycloisomerase-like 8 346 0.0
PRINTS PR00145 Argininosuccinate lyase family signature - - 278 294 3.8E-12
CDD cd01597 pCLME - - 8 447 0.0
Pfam PF10397 Adenylosuccinate lyase C-terminus IPR019468 Adenylosuccinate lyase C-terminal 367 444 7.3E-21
PRINTS PR00145 Argininosuccinate lyase family signature - - 143 163 3.8E-12
Gene3D G3DSA:1.10.40.30 - - - 365 452 1.6E-30
SMART SM00998 ADSL_C_2 IPR019468 Adenylosuccinate lyase C-terminal 366 445 2.8E-31
PRINTS PR00145 Argininosuccinate lyase family signature - - 233 257 3.8E-12
PANTHER PTHR43172 ADENYLOSUCCINATE LYASE - - 6 451 3.0E-118
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain) - - 2 361 9.8E-120
PRINTS PR00145 Argininosuccinate lyase family signature - - 102 124 3.8E-12
SUPERFAMILY SSF48557 L-aspartase-like IPR008948 L-Aspartase-like 8 448 2.2E-124
FunFam G3DSA:1.10.40.30:FF:000007 Adenylosuccinate lyase - - 366 447 3.7E-23
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 103 121 1.0E-25
Pfam PF00206 Lyase IPR022761 Fumarate lyase, N-terminal 16 303 4.2E-68
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 233 260 1.0E-25
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 278 294 1.0E-25
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 148 166 1.0E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.