Pseudomonas stutzeri NT0124, TK79_RS08325
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0124 206_43957_10399781_9839, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGGCTGCGAAAAGGATTTCGCTGAGTGCCGCATCCGGCCAGCCGCCAGCGGGCAAGAGCGCATCCAGCATGGCATGTCCGGTCGGTTGGGCCGCCGTAG GAGATGCAACGGCCTGGCCACGCCAGATGCGGCGAGCATCCAGCAGGCGGTCAAGGGCGACCACGGAAGACATGAGTACGGCATCCAGATAACTGTATAT AGATACAGTATTAGGCGGCTCATGCCTGGTCAAGTTGGCTCGGATGGACGCGCGTATCCGGTGGGTCTGCTGACAGGTCGAGCGGCGCTGCCCGGGGAAA ACAGCCAGAACCAGGCATCAATAGCCGTCGCTTGTACTTGGAAAATCAGTGCATTAGCATTCGCGCCCGGGATGCGAGGCCTCACTGTTCCCGGCCATAT CGAGATAGAAAGCCCGGTTCGGTCGCGAGCCGGGCTTTTTCTTTGCTGTGCGGGGCGCATCATGGGTCCTGCTTCGACGAAGCTGAACGAGGGGAATGCC
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| DNA Sequence for Gene |
>TK79_RS08325
ATGCGCGAGCGCCTGCTGGCCGCGGAAAAGGTGAAATCGATCGAGTGGCATGGCGATCGCCTGAGCCTGCTCGATCAGCGCAAGCTGCCGACCGAAGAGC TCTGGCACAGCTGCGATTCTGCCGCTGCGGTCGCTGACGCCATTCGCAACATGGTCGTGCGCGGCGCGCCTGCCATCGGCATCAGTGCGGCCTATGCGCT GGTCCTGGCTGCCCGTACGCGCATGGCGGCCGGTGGTGATTGGCGGCAGGCGCTGGAGGAAGATGTCGCGCTCCTTGCTGCATCGCGTCCCACGGCGGTC AATCTGTTCTGGGCGCTGAATCAGATGCGCGAACGTCTCGAACGCCTCAAGCCAGGCGAGGATCCTTGCGCGGCGCTGGAGGCCCAGGCCATCTCGATAC ATGAGAGCGATCGGGAGGCCAATCTGGCCATGGCGCAGTTCGGTGTCGACCTCATTCGTCGCCATCAGGGCAATCCGCAGAACCTGCTTACTCACTGCAA CACCGGTGCCCTGGCGACCGGCGGTTTTGGCACCGCGCTCGGTGTCATCCGCGCGGCGCATCTCGATGGGCTGGTGGAGCGCGTCTACGTGGACGAAACC CGCCCCTGGCTGCAGGGTTCTCGCCTGACCGCCTGGGAGCTGCTGGGCGATGGCGTGCCGGCCACGTTGAACGTCGATTCGGCGGCCGCCCATCTGATGA AGTCGCGCGGTATTTCCTGGGTGATCGTCGGGGCGGATCGCATCACTGCCAACGGCGATGTGGCGAACAAGATCGGCACCTACCAGCTTGCGGTGCTGGC GATGCACCACGGCGTGCGTTTCATGGTGGTGGCGCCCAGTTCGACCATCGACATGGCTCTGGAAAGCGGTGACGAGATCCTTCTCGAGGAGCGTGCCGGC AGCGAGCTGCTGGAGGTCAATGGCCAGCGTTTTGCCGCCGAGATCGAAGTTTTCAATCCTGTGTTCGACGTGACGCCGGCCGATCTCATCGATGCCATTG TCACCGAGAAGGGAGTGGTCGAGCGCCCGAACGCCGCGAAGATGACCGAATTGATGAACCGCAAGCGGTTGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATCGCTGCCGACCTTGCGCGCCATCTCGATGGCTGCGCATGTCCTTCGCCTCGGCAAGCTCTGCGAGGCTCCTGCCTGAGGGGCTTCAGGTTATTCCGC AAGGCTCGCTGGCTCGGTTTTGCTGTGCGCAAGGCTCAGCTTATGGCCGCCGTCTGTGTTACCATCCCGCGCTTATCGCAGGACCCTGCTGACTATAAGG AACCAGGCTTCCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTCAAGCAGTCCTACCTTGATTACGCCATGAGCGTGATCA TCGGCCGTGCGCTGCCGGACGCGCGCGATGGCCTGAAACCGGTGCACCGTCGCGTGCTCTACGCCATGAGCGAGCTGGGCAACGACTGGAACAAGCCGTA CAAGAAATCCGCCCGTGTGGTCGGTGACGTGATCGGTAAGTACCACCCGCACGGCGACTCCGCGGTGTACGACACCATCGTGCGTATGGCGCAGCCGTTC
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| Amino Acid Sequence |
>methylthioribose-1-phosphate isomerase
MRERLLAAEKVKSIEWHGDRLSLLDQRKLPTEELWHSCDSAAAVADAIRNMVVRGAPAIGISAAYALVLAARTRMAAGGDWRQALEEDVALLAASRPTAV NLFWALNQMRERLERLKPGEDPCAALEAQAISIHESDREANLAMAQFGVDLIRRHQGNPQNLLTHCNTGALATGGFGTALGVIRAAHLDGLVERVYVDET RPWLQGSRLTAWELLGDGVPATLNVDSAAAHLMKSRGISWVIVGADRITANGDVANKIGTYQLAVLAMHHGVRFMVVAPSSTIDMALESGDEILLEERAG SELLEVNGQRFAAEIEVFNPVFDVTPADLIDAIVTEKGVVERPNAAKMTELMNRKRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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