Strain | Pseudomonas stutzeri strain NT0124 205_597461_79187610_88_86, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCCCAGTGGCCGGCGGCGGCACCGGCGGCAGTCGGCTTGCCGTCTACCTCGGCCGGCTCGCAGCTGCCTTTGGCGTGGATATGAAAGCCGTGCAGGCCG GCCTGCAGCCCGGTCAGCTCGGGGCGAAACACCAGGCCGTACTCGCTGCTCTCGATCTTTACGCTGCCCACGGATTCGCCAATGCCCTGGGCGGTGACGG CGTTGACCTTGACGCTCAGGGTTTCCGCCTGGGCGGCGAGGGCGGTGCAGCCGGCCAGCGCGGCGATGATCCACTGTTTCATCTGAAAGCTCCTTTGCAC GAACGGCGACGGGCTGTCGCCGGTTGCTAGTGTGACTGTCAGTTGGCGGTCGCGTTCGGCTGACTGCGCCTTCGCCCTACGACCGCCGGGCCGGCCGCTG GCGCGGACCGCAGCGCGACCGCGAAGTTGGACCCCTTCTTGCTATAACCCGGTCGGGACGCATGTCGCGTCAAGAATTCGTTCTGTATTCCGGGGTTTCT
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DNA Sequence for Gene |
>TK79_RS07070
GTGGATCGCACGCAACTCATCAATATTCGCAACGGCCTGGCAGGCGCGGGGCGCGGCAATCTCGGCGTACCGCTGCTGTTGCTCGTGATGATGGGCATGA TGATGCTGCCGGTGCCGCCGTTCCTGCTGGACGTGCTGTTCACCTTCAATATCGCGCTGTCGATCGTCGTGCTGCTGGTCAGCGTCTATGCACTGCGGCC GCTGGATTTCGCCGTGTTCCCGACGATTCTGCTGGTCGCCACTCTGATGCGTCTGGCGTTGAACGTGGCGTCTACGCGAGTGGTGCTCATCCACGGTCAT GACGGCGGCAGCGCGGCTGGTCACGTGATCGAGGCATTCGGCAATGTGGTGATCGGCGGCAACTACGTGGTCGGTGTGGTGGTGTTCGCCATCCTCATGA TCATCAACTTCGTGGTGGTGACCAAGGGTGCCGGGCGCATCTCCGAGGTCAGCGCACGCTTTACCCTGGATGCCATGCCGGGCAAGCAGATGGCGATCGA CGCCGACCTGAACGCCGGCCTCATCGACCAGGAAGAAGCCAAGAAACGTCGCTCCGAGGTGTCTTCGGAAGCCGACTTCTACGGCTCCATGGACGGTGCC TCGAAGTTCGTCCGCGGCGATGCGATCGCCGGCCTGCTGATCCTGTTCATCAACCTCATCGGTGGTATCGCCATCGGTATCGCGCAGCACCAGATGAGCT TCAGCGAGGCCGGCCAGGTGTACGCGCTGCTGACCATCGGTGACGGTCTGGTGGCGCAGATTCCATCGCTGCTGCTGTCGACGGCGGCGGCGATCATGGT TACCCGCGTGACCAGTTCCGAGGACATGGGGCAGCAGGTGCAGCGGCAGATGTTCGCTTCCCCCAAGGCGCTGGCCGTGTCGGCGGCGATCATGATCGCG ATGGGCCTGGTGCCGGGCATGCCGCATTTCTCCTTTCTGAGTCTCGGGGCGGCTGCCGCCGCTGGCGCCTACTGGATCTGGCATCGGCAGAAGCAGGCGG TCAAGAAGACCGAGCAGGAAGTGCAGAAGCAGCAGGAGATGTTGCCGGCCCAGCGCGCGGCCGAGACCAAGGAGCTGGGTTGGGATGACGTGACTCCGGT GGACATGGTCGGTCTGGAAGTGGGTTATCGCCTGATTCCGCTGGTGGATCGCAACCAGGGTGGCCAGCTGTTGGCGCGTATCAAGGGCGTTCGCAAGAAG CTTTCGCAGGATCTGGGTTTTCTCATGCCGTCGGTGCATATCCGCGACAACCTCGACCTGCTGCCCAACGCCTATCGACTGACGCTGATGGGGGTGAGCC TGGCCGAAGCTGAGGTCTACCCGGATCGCGAGCTGGCGATCAACCCGGGGCAGGTGTTCGGTCCGCTCAACGGTATCGCCGCCAGGGATCCGGCGTTCGG TCTGGAGGCGGTCTGGATCGAAGCGAGCCAGCGCGACCAGGCGCAGTCGCTCGGCTATACCGTGGTGGATGCGAGTACCGTCGTCGCCACGCACCTCAAC CAGGTTCTGCACAAGCATGCCCATGAGCTGCTCGGGCATGAAGAGGTCCAGCAGCTGCTGCAGCTGCTGGCCAAGAGTTCGCCAAAGCTGGCCGAGGAGC TGGTGCCGGGCATGGTGTCGCTTTCGACGCTGCTCAAGGTGCTGCAGGCGCTGCTGCAGGAGCAGGTGCCGGTACGCGACATCCGCACCATCGCCGAGGC CATCGCTAACGTGGCCGCCAAGAGTCAAGATCCCGCCGCAATGGTGGCCGCGGTCCGTGTCGCGCTGTCGCGCGCAATCGTGCAAAACGTGGTGGGACTA GAGCCGGAGCTCCCTGTGATCACCCTCGAGCCCCGGTTGGAACAGATCTTGCTCAATAGCTTGCAGAAGGCCAATCAGGGCTCCGACGACGGCATTTTGC TCGAGCCCGGAATGGCCGAAAAGTTGCAACGGTCCTTGGTAGAAGCGGCACAGCGTCAAGAAATGCTCGGCAAGCCAGCGATTCTGCTGGTGGCCGGCCC GGTCAGGGCGATGCTGTCGCGATTTGCGCGTCTGGCGGTGCCGAACATCCATGTTCTGGCCTACCAGGAAATACCGGACAACAAGCAGGTCACCATCGTC TCGACGGTGGGTCAGAATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGAGGGTGCAGGCCATGCAGGTCAAACGTTTCTTCGCCGCCGATATGCGCATCGCCATGAAAATGGTGCGTGACGAGCTGGGCGCCGATGCCGTGATCA TCGGCAATCGCCGGGTCGCCGGCGGCGTCGAGCTGACGGCTGTCCTCGACTACCCGATGCAGTCCGCGCCGGCGGCAGCCAAGCCGAATGCTGCGCTGGA GGCCGAATTGCGCAAGACGCAGTCGCGCCTGGCCAGTGCCCATGCCGAGCTGAGTGCCGCACCCCGCGCGAAGATGCAGGATCGTCAACTGGTTGACGAG AAGCCAGCCGCTGCGGCGAGCAAGCCGCAACCTGCCGCGGTGGCCGAGCCGGCCGCTGCGGTGGACGCCCGCGCGATCGAGGCGATGTATTCGGAACTGC ACGGCCTGCGCGAGCTGATCGAAGTGCAGCTCGGTTCGATCGCCTGGGGCCAGGAGCAGAGCCGCCGCCCGCAGCAGGCGGGCCTGTGGCGTCGCCTGCA
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Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRTQLINIRNGLAGAGRGNLGVPLLLLVMMGMMMLPVPPFLLDVLFTFNIALSIVVLLVSVYALRPLDFAVFPTILLVATLMRLALNVASTRVVLIHGH DGGSAAGHVIEAFGNVVIGGNYVVGVVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQEEAKKRRSEVSSEADFYGSMDGA SKFVRGDAIAGLLILFINLIGGIAIGIAQHQMSFSEAGQVYALLTIGDGLVAQIPSLLLSTAAAIMVTRVTSSEDMGQQVQRQMFASPKALAVSAAIMIA MGLVPGMPHFSFLSLGAAAAAGAYWIWHRQKQAVKKTEQEVQKQQEMLPAQRAAETKELGWDDVTPVDMVGLEVGYRLIPLVDRNQGGQLLARIKGVRKK LSQDLGFLMPSVHIRDNLDLLPNAYRLTLMGVSLAEAEVYPDRELAINPGQVFGPLNGIAARDPAFGLEAVWIEASQRDQAQSLGYTVVDASTVVATHLN QVLHKHAHELLGHEEVQQLLQLLAKSSPKLAEELVPGMVSLSTLLKVLQALLQEQVPVRDIRTIAEAIANVAAKSQDPAAMVAAVRVALSRAIVQNVVGL EPELPVITLEPRLEQILLNSLQKANQGSDDGILLEPGMAEKLQRSLVEAAQRQEMLGKPAILLVAGPVRAMLSRFARLAVPNIHVLAYQEIPDNKQVTIV STVGQN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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