Strain | Pseudomonas stutzeri strain NT0124 205_597461_79187610_88_86, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGCCTGCTGCGCCCACTCGGCGGTGCCCTGGCCGACCGCATCGGCGGCATTCGCGCGCTGCTGGTGATGTACACGGTCGCCGCCATCTGTATCGCCGCA GTCGGCTTCAACCTGCCCAGTTCCACGGCTGCGCTGGCGCTGTTCGTGGTCGCCATGCTCAGCCTCGGTGCCGGCAATGGAGCGGTGTTCCAGCTGGTGC CACAGCGCTTCAACAAGGAAATCGGCGTGATGACCGGGCTGGTGGGCATGGCCGGCGGCATCGGTGGCTTCCTGCTCACCGCCGGGCTGGGCGCGGTCAA GCAGTCCACCGGCGATTACCAGCTCGGCCTCTGGCTTTTCGCCAGCCTCGGTGTGCTCGCCTGGTTCGGCCTGCATGGTGTCAAGCGTCGCTGGCGCACC ACCTGGGGTTCGGCCGCCGTCACCGCCGCGCGGGTCTGATGCCGATGCCGCAGGGCGCGATTATTGCTGCACCGCCGTACCGAGCCTTTCGAGAACGATC
|
|
DNA Sequence for Gene |
>TK79_RS06115
ATGCCCCTGCGATTGAGTTACGGCGAGGCCAGCGCCGCCGGCCCGCGGCCGGAAAACCAGGATGCGCTGCGCGTCGTCACGCCGGCCCCGGCGCTGGCCA CCGGCAAGGGCTATCTGTTCGCGCTGGCCGATGGCGTCAGCCAGTGCGCCGATGGCGGCCTCGCCGCGCGTGCGACGCTCCAGGCGCTGGCCTTCGACTA CTACGCGACGCCGGAAACCTGGGCCGTCGCACAGTCGCTGGACCGAGTGCTGGTGGCGCACAACCGCTGGCTGCAGGCCAACGGTGGCAACCAGCCGCTG CTGACCACACTCACAGCGCTGGTACTGCGCGGCCGACGCTTCACCCTGGCGCATGTCGGCGACTGCCGCGCCTATCGCTGGAACGGCGCCGAGCTGGAGC GACTCAGCGAAGACCACGTCTGGGAACAGTCGGGCATGCAGCATGTCCTCAAGCGTGCCCTGGGGCTGGATCAACACCTGGTGATGGACTACCTCGACGG CGAGCTGCAGGAAGGCGAAAGCTACCTGCTGCTGAGCGACGGGGTGTGGTCGTGCGTCCCCGAGCGCGACATCGCGCATATCCTGCACGATCAACCCGAC CTCGGTGCCGCCGCCCGGGCGCTGGTCAATCTGGCGCACCAGAGCGGCAGCCAGGACAACGCCAGCGCCCTGCTGCTACGGGTGGATGCGCTGCCCGAGG CGGTGCTGGCGGACGCCCTCGCCCAGCTCGATCATTGGCCGTTGCCGCCGAAGCTGCGCGCCGGGCAGACCTTCGAGGGCTGGCGGGTAACCGCGCTGCT GCATGAGTCGCGGCAGTCGCTGATCTACCGCGTACTGGATGGTCAGGGCCAACCGTGGCTGTTGAAGACGCTGCCGCCCAGCCGGCAGGACGAGTTGGAC GCCGGCCCCGCCCTGCTGCAGGAAGAGTGGTTCATGCGCCGCGTCGCCGGGCGGTACTTCGCCGAGCTGCATCCCCTGCCACAGCGCCAGCATCTCTATT ACGTGCAGCGCGAGTACCCCGGCTGCACCCTGGCGCGACGCTTCGCAGAAGAAGGTCCGCTGCCATTTGCCGATCTATTGCAGATCGCCCCCCGGCTGAT CCGCGCGGTCGGGATGCTGCATCGGCGCAACATCCTGCACCGCGACATCAAGCCGGAAAACCTGCTGCTGGGCGAAGACGGCGAACTGCGTCTGCTGGAT TTCGGCCTGGCGTTCTGTCCGGGATTGTCCCGCGACCTGCCCAACCACCTGCCGGGCACGCCCAGCTTCATAGCCCCGGAGGCTTTCGCCGGTGCCGAGC CAAGCCCCGCGCAAGACCTCTATGCGACTGGCGTGACGCTCTATTACCTGCTGACCGGGCACTACCCCTACGGCGAGATCGAGGCGTTTCAGCGTCCACG ATTCGGCCAGCCGACGGCAGCCAGCCGCTATCGCCCCGACCTACCGAGCTGGCTGGAGGAAAGCCTGAGCCGCGCGGTGGCGGTCGATCCACGCCAGCGC TTCGAAACCGCCGAGCAGTGGTTGCTGGAACTGGAACAGGGCGAACAGCGCAGCGCCAGTCTGCAACCCCGCCCGCTGCTCGAACGCGAGCCGCTGAAGG TCTGGCGCGGCATGGCACTGCTGTCGCTGCTGCTCAACCTGTTGCTGGTCGTACTGCTGATGAAGAGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TTCAGCGCCGGGTGATCAGGCCCTGACGCGCGACGCGGGTCAGCTCACGCACGCATTCTTCCAGGCGCTCTGCTGTCGGCGCCTGGATCACGGCCAAGTC GAAGCTGTCGGTGGCAAAACGCGCCAGCGACTCGTCGGCCGAGGCGAACTGGATAAGCAGGGCGCGGGATTTGCGATGGCGTCGCGGCCAGCCTTCCAGG TAGCGCAACAAGGAGGGCTGGTGAGAACCACCCAGGAGGATCTTGGGATTGCTGGGAGTGAGGCCGCTAGTGATGGGGGCCAGGCGCAGCTGAGCATGCT TTGCATTCATTGATTCGACTTCCGCCTCGAGGATTCCGCTGGGCAGCGGTGGGAGGCGACACCGGAACCAGCGCTTTAGCGGTATTTCGAAGCCTTCGGC TCCAGGCGCCCCGCAAGTAGCTGACTAAATCGGCGCATGGGCAAGACTTTAGAAAAGCCGGCCACCCCCTGTCAACGCTCCGTCCTCGGAACGAGCCAGG
|
|
Amino Acid Sequence |
>protein kinase
MPLRLSYGEASAAGPRPENQDALRVVTPAPALATGKGYLFALADGVSQCADGGLAARATLQALAFDYYATPETWAVAQSLDRVLVAHNRWLQANGGNQPL LTTLTALVLRGRRFTLAHVGDCRAYRWNGAELERLSEDHVWEQSGMQHVLKRALGLDQHLVMDYLDGELQEGESYLLLSDGVWSCVPERDIAHILHDQPD LGAAARALVNLAHQSGSQDNASALLLRVDALPEAVLADALAQLDHWPLPPKLRAGQTFEGWRVTALLHESRQSLIYRVLDGQGQPWLLKTLPPSRQDELD AGPALLQEEWFMRRVAGRYFAELHPLPQRQHLYYVQREYPGCTLARRFAEEGPLPFADLLQIAPRLIRAVGMLHRRNILHRDIKPENLLLGEDGELRLLD FGLAFCPGLSRDLPNHLPGTPSFIAPEAFAGAEPSPAQDLYATGVTLYYLLTGHYPYGEIEAFQRPRFGQPTAASRYRPDLPSWLEESLSRAVAVDPRQR FETAEQWLLELEQGEQRSASLQPRPLLEREPLKVWRGMALLSLLLNLLLVVLLMKSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|