Pseudomonas stutzeri NT0124, TK79_RS06025
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0124 205_597461_79187610_88_86, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGCTCTTCGGTGACCGAACCACGGCGCGCCAGGCAGACGAAACCGTAGTCTTCACCGCCGATATAACCAAGCTCGTTGGCTTCCATCGCCTCGCTGAT GAATGCTTCGAGGAAGTCATCCACGGCCTTGCTTTCGATACCTTCGCGATAGGTGAGATTGATCTCGAAGCCCAGCTCCTGGAACTCATCGACACAGAGT TTCTTGCGCAGGCGACGCGAACGATTGGTAGCCATTGGATCGATCCTTTTTTCAACGTGATGACGGCGCGCACTCTAACAGCAACCCGATGCCAAGGCGA TGACCGAGAACCGCCACCGCAACGGCTCGCCATCTTGTTTTGCAGTAACCCCTGCGACGCAGCTACGCTTATCGGATAGAGGCACAGCGCCTCTACGGGC CGGGCATAATGGCCCGCAATCGTTCCCTTAGTGCAGTGGGAAATCGCATGCCGAATCGAATCGCCAGCAGCCCCCTGTGTGCGCTCAGAGGCGCTCGCAA
|
|
| DNA Sequence for Gene |
>TK79_RS06025
ATGAACAGAATCCTTCGTGGTATCTCCCTGGCCGTTCTGGCCTTTCCCATTGCGCTGCCGATTCATGCGGCCGGCGTGAACCAGACGCTGCCTGCGCGTG TGGAACAGGCGCTCAAGGCCAACAAGATCAACAACGATGCGCTGTCGGTCGTCATGCTGCCGCTTACCGGCAACGCGGCACCGACAATCGTCAATGCAGA CGTATCGGTCAATCCCGCCTCGACCATGAAATTGGTCACCACCTACGCCGCACTCGAACTGCTCGGGCCCAATCATCAGTGGAAAACCGAGTTCTATGCC GACGGCCCGCTGGTGGATGGCGTGCTCAATGGCAATCTTTATCTGAAAGGTGGCGGCGATCCCAAGCTGAACATGGAGAAGCTCTGGTTGCTGCTGCGTG ATCTGCGCGCCAACGGTGTGAGCAAGGTCACCGGCGATCTGGTGCTGGATCGCAGCCACTTCGTCCAGCCCGACCTGCCGGTATTCGACGATGACGGCGG CGACCAGAACAAGCCGTTCCTCGTCGGCCCCGATTCGCTACTGGTCAACCTCAAGGCGCTGCGCTTCATCGTCCGCAACGATGGGGGCAAGGTGAACGTG GCGGTGGAGCCGCCCATTGCCAGCGTCCGCATCGACAACCGCGTTCAGGCCTTGCCGGCAGCCAAGTGCCCAGGCTGGCCAGAGGTGCTGTACAACCCCG TTGCCGACGGCGACGGGGTCACCGTGGTGGTCACGGGCAAGCTCGCCGCTGGTTGCAGCGCGCAGACCTATCTTTCCCTGCTGGACCACGAACGCTATGC CGCAGGCGCGGTGCGGGCGATCTGGGGCGAACTCGGCGGCAGCATCCTGGGCACTGATCGTGTCGCCCAGGTACCGAGCAGCGCCCGCCTGCTGGCCAGG GCCTACTCCCCGGACCTCACCGAGATCATTCGCGACGTCAACAAGTACAGCAACAACACCATGGCCAAGCAGCTGTTCCTGAGCCTGGGTGCTGCGTTCC GCAACGAAGCGGATGCCGATGACGCCAAGGCGGCACAGCGAGTGATCCGTCAGTGGCTGGCCAAGAAGGGGCTGATTTCCCCGCACCTGGTGATCGAGAA CGGCTCCGGCCTTTCCCGTGCCGAGCGGGTCAGCGCGCGTGAACTGGCGAGTTTGCTGCAGGCCGCCTGGCGCAGCCCCTACTCGGCCGAGTTCATCTCC TCGATGCCCTTGGCGGCCGTGGACGGCACCATGCGCAAGCGTCTGCGCAACACGCCGGTCGCCGGCAAGGCACACGTGAAGACGGGCACGCTGAATACGG TGCGCGCGATCGCGGGCTACAGTCGAGACGGCGACGGCAATGTCTGGGCGGTGGTGGCGATCCTCAACCACCCGCGTCCATGGGGCGCCTCGTCGATCCT GGATCAGGTGCTGGTCAGCCTGTACAACCAGCGCAGCGAAAGCACCGCTCAGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGCTACAGAAAGAGCGGGCCTGCCTGAGGCCCGCTCAGAACCGTCATCACCGCGCCTGGAGTTTCCAGGCACGGTGGATTCGCGGATTGCGGCGGAAGT CCTCATCCAGCGTAGAAGCCGTGATTTCCTCTACTGCGTAACGATCCATCAGGCTCGCGTCCAGCACGAACTTGCGGAAGTTGTTGGAGAAATACAGCGT CCCGCCGGTAGCCAGCCGCGCCATCGCCAGGTCGAGCAGGGCAACGTGGTCACGCTGCACGTCGAACACGCCTTCCATGCGCTTGGAGTTGGAGAAGGTC GGCGGGTCAATGAAGATCAGGTCGTATTCGCCGCGATCCGCTTCCAGCCAGGCCATCACGTCTCCCTGTTCCAGCCGCTGGCGGTCCGAGAAGCCGTTGA GCGAAAGGTTGCGCCGCGCCCAGTCCAGATAGGTCCTGGACAGGTCGACACTGGTAGTGCTGCGGGCGCCGCCCTTGGCCGCGTGCACGGTTGCCGTTGC
|
|
| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MNRILRGISLAVLAFPIALPIHAAGVNQTLPARVEQALKANKINNDALSVVMLPLTGNAAPTIVNADVSVNPASTMKLVTTYAALELLGPNHQWKTEFYA DGPLVDGVLNGNLYLKGGGDPKLNMEKLWLLLRDLRANGVSKVTGDLVLDRSHFVQPDLPVFDDDGGDQNKPFLVGPDSLLVNLKALRFIVRNDGGKVNV AVEPPIASVRIDNRVQALPAAKCPGWPEVLYNPVADGDGVTVVVTGKLAAGCSAQTYLSLLDHERYAAGAVRAIWGELGGSILGTDRVAQVPSSARLLAR AYSPDLTEIIRDVNKYSNNTMAKQLFLSLGAAFRNEADADDAKAAQRVIRQWLAKKGLISPHLVIENGSGLSRAERVSARELASLLQAAWRSPYSAEFIS SMPLAAVDGTMRKRLRNTPVAGKAHVKTGTLNTVRAIAGYSRDGDGNVWAVVAILNHPRPWGASSILDQVLVSLYNQRSESTAQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|