Strain | Pseudomonas stutzeri strain NT0124 203_387811_46306447_71_108_, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGCCACGATGGTGGCGGCCCAGGACCAGCAGGTCGGCTTCCAGCCCTTCGGCCTGGGTGAGGATTTCCTCCACCGTCGGGCCGCGGCGAATCCAGGGCT CGAGCTGATCCAGCTGCTGCTCGCGCAGACGCTCCTGCAGCCAGGCGCGTGCCGCGTGCTCGTCGGCTGACGGGTCGCGCTCGTCGAGCACGTGCAGCAG GCTGAGCCGTGCGCCTGTCTGTCGCGCCAGCTGGACGGCACGCTGCAGGGCCAGATCGGCGTCCGGGCTGAGATCGTGAGCGACGAGAATGTGCTGGAAC ATGACTGGCCTCGCGAAGCTGGAGAAGAGGCGAGTATGCCGCGCCGCGGCAAGGCTGTCCTGCTGCAAGCCAGCAGCGGAGGGGGCGTCGCGGCGGTTTC TGGCTGATCCGGCGCAACAACTTGCGCATCCATGCCCTTGCGCGCTTTTGTCGATACGCTCCTGCGGCTATGCTTGCCGGCATTCGAGCAGGAGTGAAGG
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DNA Sequence for Gene |
>TK79_RS02880
ATGAGCAAGGTCAGTGTGCTGGTAGTGGATGACGCGCCCTTTATCCGCGACCTGGTAAAGAAGGCGCTGCGCAGCCAATTTCCCGGGATTCGCACCGAGG ATGCAGTGAATGGACGCAAGGCCCAGCAGATGCTCGCCCGTGAGCGCTTCGACCTGATCCTCTGCGACTGGGAGATGCCGGAGATGTCCGGCCTGGAGCT GCTGACCTGGTGCCGTACTCAGGACGCGCTGAAGGCCGTGCCGTTCATCATGGTGACCAGTCGTGGCGACAAGGAGAACGTGGTACAGGCCATCCAGGCC GGCGTATCCGACTTCATCGGCAAGCCCTTTTCCAACGAACAACTGACCAGCAAGGTGCGCAAGGCCCTCGGCCGTGCCGGCAAGCTGGATGCGTTGGCTG CCAGCGCACCGACACGGGTCCTGTCCACCGGCGTGGCCAATGACTCGCTGGCCGCACTGACCGGCGGCAAGGCGGAGGTCGTCCGTCCCGCTGCCGCTCC TGCTCCTGCTCCGGAAGCGAAGGCTGCGCCACTGATCCAGCCGACAGCCCCTGCCGCTGCCCCGGGTGCCGCCTCGTCCGGCCGCGGCCAAGGCCAGCTG CGGCTGGCCCATGGCAGCGTTGCCTGTGTGATCAAGGCGCTGAGCCTCAAGGAGGCGCTGCTGGTGGTCAAGCGTGGCGAGTCGCTGCCGCAGGTGCTGG AAAGTGCCGTGCTCGACCTGGAGCAGGGCGAGGGCGGCGAGATCGCGCGGCTCAACGGCTATCTGCATGCCGTCGCGGCGTTCGAGCCGAAGCCCGACAG CGACTGGCTGCAGCTCTCGTTCCGCTTCGTCGATCGCGATCCGCAGAAGCTCGACTACCTGTCGCGCCTGATCGCCCGCGGCACCGCTCAACGCCACTTC ACGCCCGGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGCGGGCCAGGCGACCGTTCGGCGCCTGGTCCACGCGACAAGCTGACAAGCTTCACACCCCGACGGTCGGTGGCTCGCGCAGGCCAACCGCCACTGCTA GTCTTTGCGCTCCAACACCATAATCACTAGAAATCTGCCGTTATGCTGGGGCGCATTCTTCTGTTGCTCGGGCTGCCGCTGCTGGCCTCGCCGGCCTTGG CCCTGACCATCTACAAATACACCGACGCCAATGGAGTCGTGACCTATAGCGACCAGGCCGCGCCTGGTGCGCAGGTGTTCGTCTTCCGCGACCGCATGGT GGAAAAGCTCGACACTCAGGTGAAGCTGGAAACCCGCAAGCACGATGCGGGCGAAACGCTGCTGGTGCGCAACGACCTGTTCGCGCCGGTGGATATCGAG CTGAAGCTGGAGAACGTCGAGAACGCCGTGGGCGCACCGACCAAGCCGATCCGCTGGGTGCTGCCGCCACGCAGCCAGATCCGCCTGGCGACCCTGGCGC
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Amino Acid Sequence |
>chemotaxis protein CheY
MSKVSVLVVDDAPFIRDLVKKALRSQFPGIRTEDAVNGRKAQQMLARERFDLILCDWEMPEMSGLELLTWCRTQDALKAVPFIMVTSRGDKENVVQAIQA GVSDFIGKPFSNEQLTSKVRKALGRAGKLDALAASAPTRVLSTGVANDSLAALTGGKAEVVRPAAAPAPAPEAKAAPLIQPTAPAAAPGAASSGRGQGQL RLAHGSVACVIKALSLKEALLVVKRGESLPQVLESAVLDLEQGEGGEIARLNGYLHAVAAFEPKPDSDWLQLSFRFVDRDPQKLDYLSRLIARGTAQRHF TPGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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