Pseudomonas stutzeri NT0124, TK79_RS02835

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri strain NT0124 202_114599_13384203_52189138, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCTGCACCAACCAGAACCTGCCGCGCCAGCTGAAGCTCGGCGACATCTGCAAGCCCTGCGAAGACACCCCGGAATTTCTCAGCTTCCGCAATATCTCGG CGGTCACCCCGAGCTACGCGCCGCCGCTGCAGCGCGACTATCTGTGGAAGCTGATCAGCAACATGTCGCTGAACTACCTGTCGCTGGCCAACGTCGAGGC GCTCAAGGTGATCCTCGAGACCTACGACCTACCACGCTATTACGACAAGCATGCCGAGAACGTCAGCCGGCGGCGCCTCGGCGGCCTGACTCACATCGCC CACCAGCACGTCGATCGCCTGCATCGCGGGCTGCCGGTGCGTGGCGTACGTACCGAACTGACCATGAACCAGGACGGCTTCATTGGTGAGGGCGATCTGT TCCTCTTCGCCTCGGTGCTCAACGAATTCTTCGCCCTCTACGCCAGCCTCAACTCGTATCACGAGCTGCGCGTGCAGAGCACACAGGGAGAGGTGTACCA
DNA Sequence for Gene
>TK79_RS02835
ATGGACGCCGCGCATGGGTCAGCAACCGCTGCTCTGAAACCGCTCAACCGCGGCATCCGCGAGTACAGCCTGTTCCAGGGCGTGCTGCTGGTGCTCGATC GCCTGCGCCAGCTCAATCCCGGGCTGGATGACGAGGCGCTCTACGAGCGCCTGGAATTCCAGGCCAACCCGAGCCTGGGCTTTCCCGGCAGTGATATCGA GCAGGTGCAGTTCTTCCAGGAGCACGGCGAGTGGCGCGCCCGCCTGCGCATCAACCTGGTCAGCCTGTTCGGCGCCGGCTCGCCGCTGCCGGCCTTCTAC GGCGAACAAGCGCTTGGCGACAGCGAAGACGGCAACCCGACCCGCGACTTCCTCGACCTGTTCAACAACCGCCTGCAGCGCCTGCTGCTGCCGATCTGGC AGAAGTACCGATACCGCGCCAGCTTCACCAGTGGCGCCCATGACCCCTTCTCGGAGCAGCTGTTCGCCCTGGTCGGACTCAGCGGCGAGGCCATCCGCAG CGCGCCGGAGCTGAACTGGAAGCGCCTGCTGCCCTATCTCGGCCTGCTCAGCCTGCGCGCGCACTCGGCAGCATTGATCGAATCGGTGCTGCGCTACTAC TTCAAGCACGCCGAGTTGAACATCGAGCAATGCCTGGAGCGCCGGGTGGAAATCCTCGGCGAGCAACGCAACCGGCTCGGGCTGGCCAACAGTCAGCTGG GCGAAAGCCTGGTGCTCGGCGAGCGGGTCCGCGACCGCGGCGGCAAGTTCCGCATCCATATCCGCCAGCTGGACTGGAATCGCTTCCACGAATTCCTGCC CATCGGCAGCGGCTACCAGCCGCTCTGTGCGCTGGTGCGCTTCACCCTGCGCGATCCGCTGGATTACGACCTGCGCCTGGAGCTTCGCCCGGACGAGATC CGTGAGCTACGCATCGGCGCCGACAACAACTGCCGCCTCGGCTGGACCAGCTGGCTCGGACGCGACCGCGCCGACGGTCTGGTCACCCTGGGCAGCAAGA CTCATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAAGATGAAAATGATCAACGTCGACTTACAGCAACTGGTGCAAGCCCTGGATGCCCCCAGTAAACAGGATCTGGAAGGCGCAGCCGAACGCTGCGTGAT ACGTGGCGGCAGCAAGGTTCTCGTCGAGGACCTGCTGCTCGGCCTGCTCGAGCGTCCCGATGGACTGCTCAAGCGAGCCTTGCTGGATGCCGAAGTCGAT ACCGGCGCACTGGCGCAGGCGCTGCAACCGCGAGGCGAGCGCAGCGAATCGCGCAACCCGGTGTTTTCCACCGAACTGGTGCAATGGCTACAGGATGCCC TGCTGGTGGCCAGTCTGGAACTCGGCCAGAGCCAGATTGACCAGGCCGCACTGATTCTCGCGCTGCTGCGCAATCCGCTGCGCTATGCAGGCAGTCATTA CCAGCCATTGCTGGCCCGGCTGGATGCCGAGCGCCTGCGCGACTTCGCCCTAAGCCAGCAGCCTCAAGGCAGCACTGGCAAACCTGCTGCCGGTGGCGAG
Amino Acid Sequence
>type VI secretion protein
MDAAHGSATAALKPLNRGIREYSLFQGVLLVLDRLRQLNPGLDDEALYERLEFQANPSLGFPGSDIEQVQFFQEHGEWRARLRINLVSLFGAGSPLPAFY GEQALGDSEDGNPTRDFLDLFNNRLQRLLLPIWQKYRYRASFTSGAHDPFSEQLFALVGLSGEAIRSAPELNWKRLLPYLGLLSLRAHSAALIESVLRYY FKHAELNIEQCLERRVEILGEQRNRLGLANSQLGESLVLGERVRDRGGKFRIHIRQLDWNRFHEFLPIGSGYQPLCALVRFTLRDPLDYDLRLELRPDEI RELRIGADNNCRLGWTSWLGRDRADGLVTLGSKTH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site