Pseudomonas stutzeri NT0124, TK79_RS02465
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 467 | 623 | 4.45E-52 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 457 | 626 | 1.9E-54 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 460 | 623 | 2.0E-50 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 451 | 624 | 2.4E-68 |
| Coils | Coil | Coil | - | - | 444 | 464 | - |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 463 | 620 | 1.3E-48 |
| Coils | Coil | Coil | - | - | 416 | 436 | - |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 419 | 626 | 1.8E-75 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 448 | 624 | 5.8E-62 |
| Pfam | PF07696 | 7TMR-DISM extracellular 2 | IPR011622 | 7TM-DISM receptor, extracellular domain, type 2 | 54 | 170 | 1.4E-17 |
| Gene3D | G3DSA:2.60.40.2380 | - | - | - | 48 | 178 | 8.2E-21 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 464 | 592 | 1.99569E-53 |
| Pfam | PF07695 | 7TM diverse intracellular signalling | IPR011623 | 7TM-DISM receptor, extracellular domain, type 1 | 185 | 386 | 3.0E-37 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.