Pseudomonas stutzeri NT0124, TK79_RS00110 (relA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0124 1_124377_15991832, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCGCTGGCGCGTCAGGGCGCGCAGGTGGTGGGGGTGGAAGGTGTCGAGGCGATGGTGGCGCGGGCGCAGGACAACGCGCAGCGCAACGGCCTCGAACA GGTGCACTTTTATCGGGCGGACTTGTCGAAGCCGCTTGCCGACGCACCCTGGGCGCGCAGCGGGTTCGATGCTGTGCTACTTGATCCGCCCCGTGACGGT GCGCTGGAGATCGTCCGGCAGATGACGCAGCTCCAGGCGCGCCGCGTGGTCTATGTTTCATGCAATCCGGCCACCCTGGCGCGCGATGCGCGCGAGTTGG CCAGCCAGGGCTTCCGCCTCAAGCGTGCCGGGCTGCTGGACATGTTCCCGCAGACGGCCCACGCCGAGGCCATGGCGTTGTTCGAGCGGGATTGACGCTC GGCGCAGTATTTTTTGACAGGCGACTGGCCTGTGGTTCAACCGACCGGCACGCAGAATGCCGGCGTTCATGGCGCAGATGCTGCGCAGAAGGGAAGGTAG
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| DNA Sequence for Gene |
>TK79_RS00110
|relA
ATGGTACAGGTCAGAGCGGTTCAGCCGATCAATACGGACGGCAGCATCAACCTGGATGGCTGGCTCGATCATGTGTTGGGGATGGACCCGGCACTCGACC GTGCGGCGCTGAAGGAGGCCTGCGAGTTCGCCCGCGAAGCGGAACAGCAGGCCAATGCCGCGCAGAACCTCTGGAGCGAAGGCACCTCCAGCTATCAGAT CGGCCTGGAGATCGCCGAGATCCTCGCTGACCTCAAACTGGATCAGGACAGCCTGGTCGCTGCGGTCATCTACCGCGGCGTGCGTGAGGGCAAGATTCAG CTGGCCGATGTGCACCAGCGCTTCGGGCCGGTGGTGGCCAAGCTCATCGAAGGTGTGCTGCGCATGGCGGCGATCAGCGCCAGCCTCAACCCGCGCGAAT CGCTGGTGCTCGGGTCCCAGGCGCAGGTGGAAAACCTGCGCAAGATGCTGGTGGCCATGGTCGACGACGTCCGCGTCGCGCTGATCAAGCTGGCCGAGCG CACCTGCGCCATCCGCGCGGTGAAGCTGGCCGACGACGAGAAGCGCCAGCGTGTCGCCCGCGAGGTCTTCGACATCTACGCACCGCTGGCCCACCGCCTG GGCATCGGCCACATCAAGTGGGAGCTGGAGGATCTGTCCTTCCGCTACCTCGAGCCGGAGCAGTACAAGCAGATCGCCCAGCTGCTGCACGAGCGTCGCC TCGACCGCGAGCAGTACATCACCAATGTCGTCCAGCAGCTCAAGGACGAACTGACCGCGGCCGGCATCCAGCCGGAAATTGACGGACGCGCCAAGCACAT CTATTCCATCTGGCGAAAAATGCAGAAGAAGGGCCTGCAGTTCAGCCAGATCTACGACGTTCGTGCCGTTCGTGTGCTGGTTCCGGAAGTGCGTGACTGC TACACCGCGCTGGGTATCGTGCACACCCTGTGGCGGCACATTCCCAAGGAATTCGACGATTACATCGCCAACCCCAAGGAGAATGGCTATCGCTCGCTGC ATACCGCGGTGATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGCACCCACGCCATGCACGAGGAGGCCGAACTGGGGGTCTGCGCGCACTGGCG CTACAAGGGTACCGACGTCAATTCCGGTTCGGACCACTACGAGGAAAAGATCGCCTGGCTGCGTCAGGTGCTCGAATGGCACGAAGAGCTGGGCGACATC GGCGGCCTGGCCGACCAGTTGCGCGTCGACATCGAGCCTGATCGCGTCTATGTGTTCACTCCGGATGGCCATGCCATCGACCTGCCCAAGGGCGCGACGC CGCTGGATTTCGCCTACCGGGTGCACACCGAGATCGGCCACAACTGCCGCGGGGCGAAGGTCAACGGCCGCATCGTCCCGCTCAACTACAGCCTGCAGAC CGGTGAGCAGGTGGAGATCATCACCAGCAAGCACGGCTCGCCGAGCCGCGACTGGCTGAACCCCAACCTGGGTTACATCACCACGTCACGGTCGCGGGCA AAGATCGTTCACTGGTTCAAGCTGCAGGCGCGCGACCAGAACGTCGCCGCCGGCAAGGCGCTGCTGGAGCGCGAGCTGAGCCGCCTGGACCTGCCGCCGG TGGATTTCGACAAGCTGGCCGAGAAGGCCAACCTGAAGAACGCCGAGGACATGTTCGCCGCCCTTGGTGCCGGCGACCTGCGCCTGGCGCATCTGGTCAA CATGGCCCAGCAGCTGGTCGAGCCGGAGCGCGGTTACGATCAGCTGGAGCTGATCCCGCGGCGTTCCGCGCCACACAAGCCCGGCAAGCGTGGCGATGTG CAGATCCAGGGCGTCGGCAACCTGCTGACGCAGATGGCTGGCTGCTGCCAGCCGCTGCCGGGCGACCCGATCGTCGGCTACATCACTCAGGGCCGCGGTG TCAGCATCCACCGCCAAGACTGCCCGTCGGTGCTGCAGCTGGCCGGTCGCGAGCCGGAGCGGATCATCCAGGTCAGCTGGGGCCCGGTGCCGGAGAAGAC CTATCCGGTCGAGATCATGATCCGCGCGTACGACCGTGCCGGTCTGCTGCGTGATATCTCGCAGATGCTGCTCAATGAACGCATCAACGTGCTGTCGATG AACACCCGTTCGAACAAGGAAGACAGCACCGCACAGATGACGCTGACCATCGAGATCCCGGGGTTGAATGCCCTGGGGCGCCTGCTCAGCCGTATTTCGC AGCTGCCGAATATCATCGAGGCCAAGCGTCAGCGCGCTTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCATTCCGAACGGCTGCGCTCGATCCGGTGTAGTTGAAGGCCTACCGAAAAATGCGCATTGGCAATAGCCAACTCCGCTTTTCGGTAGGCGTTCGCCGGG CCGGCTCTTCGCTCGCGACGCCCGGTGCTGAGCGACCGTCGATAGCCAAGTCTCCTTGAGGAATCCCATGTACCAACTCCCCGACCTGCTGCACCTGATG GCCCGGCTGCGCGATCCGCAGCACGGGTGCCCCTGGGATCTGCAACAGGACTACGCGAGTATCGTCCCGCACACGCTGGAGGAGGCCTACGAGGTGGCCG ATGCCATCGAAAGTGGCGACTTCGAGCATCTCCCCGGCGAGCTGGGCGATCTGCTGTTCCAGGTCGTCTACTACAGCCAATTGGCCCGGGAGGAGGGGCG CTTCGACTTCGCCACGGTGGTCGATGCCATTACCCGCAAGCTGGTGCGCCGACACCCGCATGTCTTTCCGGATGGTGACCTGTACGGCTCGCCGGAACTT
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| Amino Acid Sequence |
>(p)ppGpp synthetase
MVQVRAVQPINTDGSINLDGWLDHVLGMDPALDRAALKEACEFAREAEQQANAAQNLWSEGTSSYQIGLEIAEILADLKLDQDSLVAAVIYRGVREGKIQ LADVHQRFGPVVAKLIEGVLRMAAISASLNPRESLVLGSQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKLADDEKRQRVAREVFDIYAPLAHRL GIGHIKWELEDLSFRYLEPEQYKQIAQLLHERRLDREQYITNVVQQLKDELTAAGIQPEIDGRAKHIYSIWRKMQKKGLQFSQIYDVRAVRVLVPEVRDC YTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHAMHEEAELGVCAHWRYKGTDVNSGSDHYEEKIAWLRQVLEWHEELGDI GGLADQLRVDIEPDRVYVFTPDGHAIDLPKGATPLDFAYRVHTEIGHNCRGAKVNGRIVPLNYSLQTGEQVEIITSKHGSPSRDWLNPNLGYITTSRSRA KIVHWFKLQARDQNVAAGKALLERELSRLDLPPVDFDKLAEKANLKNAEDMFAALGAGDLRLAHLVNMAQQLVEPERGYDQLELIPRRSAPHKPGKRGDV QIQGVGNLLTQMAGCCQPLPGDPIVGYITQGRGVSIHRQDCPSVLQLAGREPERIIQVSWGPVPEKTYPVEIMIRAYDRAGLLRDISQMLLNERINVLSM NTRSNKEDSTAQMTLTIEIPGLNALGRLLSRISQLPNIIEAKRQRAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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