Pseudomonas stutzeri NT0124, TK79_RS01280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0124 198_92990_16242073_39183, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTTCAGGTTGTGCTCGACGATCTCCTCGAGCTTCGCTTCGGCCGCCTCGCGCCCCGCCGAGGCCATCCAGCGCAGCGTGGTGCTGCGCGGGTTGAAGGT GCGCTCGATGCACTCCAGCTCCTTCAGCGAGAGGCTCTGTTGCGGATGGCGATACATGCAGGCGAAGCCGATACGGGGCATGGATTCCTCGTCGATGACA GGCCGGCGCTCCGACCATTGCCTGTTTAGTCCCGCCCGCGTCGAGCCGAGTGCCCGACCGCCGACGAAACACCACCCGCGGCATCCATGGCCGGCGGCAC CGCCCTTGCCGTGCACCTATGCTTGCAGAACGCCGCCCGCTGGCATGTTGACAGACCGCTGGCGGACCTTTACGTTAACGTAAAGCAGCGAGCAGCCAGT TCCCGAAGGCGCTCAGGCTGCGACCGGAGCGCCGGCCGGAACCCGCCGGATGCACGAATTCTCTGAACACAGAACAATTACAAGACAAGCAGGTGGCCCC
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| DNA Sequence for Gene |
>TK79_RS01280
ATGAACTACTCCAGCCTCAATTTCGCCCTCGGTGAAACCATCGACATGCTGCGCGAGCAGGTCCAGGCCTTCGTCGCCGCCGAGCTGGCGCCGCGCGCCG AGGCCATCGACCAGGACAACCTGTTCCCGGCCGACATGTGGAAGAAATTCGGCGAGATGGGTCTGCTCGGCGTGACCGTCTCCGAGGAATACGGCGGCGC CGGCCTTGGCTACCTGGCCCACGTGGTGGCGATGGAAGAGATCAGCCGCGGCTCGGCCTCGGTCGCCCTCTCCTATGGCGCCCACTCCAACCTGTGCGTC AACCAGATCAACCGCAACGGCAACCCCGAGCAGAAGGCCCGCTACCTGCCCAAGCTGATCAGCGGCGAACACGTCGGCGCGCTGGCAATGAGCGAGCCGA ATGCCGGCTCCGACGTGGTTTCCATGAAGCTGCGCGCAGAAAAGCGTGGCGACCGCTACGTGCTCAACGGCAGCAAGACCTGGATCACCAACGGCCCGGA CGCCAACACCTACGTGATCTACGCCAAGACCGACCTGGACAAGGGTCCGCATGGCATCACCGCGTTCATCGTCGAGCGCGACTGGAAAGGTTTCTCCCGC GGCAACAAGTTCGACAAGCTGGGCATGCGCGGCTCCAACACCTGCGAGCTGTTCTTCGATGACGTCGAGGTGCCGCAAGAGAACGTGCTGGGCGTCGAGA ACGGCGGCGTCAAGGTGCTGATGAGCGGCCTGGATTACGAGCGCGTGGTACTGGCCGGCGGCCCGACCGGGATCATGCAGGCCTGCCTCGACGTAGTGGT GCCCTACATTCACGACCGCAAGCAGTTCGGTCAGAGCATCGGCGAGTTCCAGTTCATCCAGGGCAAGGTGGCGGACATGTACACCCAGCTCAACGCCAGC CGTGCCTATCTCTACGCCGTCGCCCAGGCCTGCGACCGTGGCGAGACCACCCGCAAGGACGCCGCCGGGGTGATCCTCTATACCGCCGAAAACGCCACGC AGATGGCCCTGCAGGCGATCCAGATCCTCGGTGGCAACGGCTACATCAACGAATTCCCCACCGGCCGCCTGCTGCGCGACGCCAAGCTCTACGAGATCGG CGCCGGCACCAGCGAGATCCGCCGCATGCTGATCGGCCGCGAGCTGTTCAACGAATCCAGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGCGGGCGGTACAACGCCCAACTCGTAGGGTGGAAAACCGCGAAGCGTTTTCCACCGCAGTCGGTGGATGGCAGAGCCATCCATGATGGAATTGAACG GAGCCAACCATGGCCATCCTGCACACCCAGATCAATACCCGTTCGCCAGAGTTCGCCGCCAACAGCGCGGCGATGCTCGAACAGGTGAACAACCTGCGCG CCCTGCTCGGCCGTGTCAGCGAAGGCGGCGGCGCCACCGCCCAGCAGCGCCACGTCTCGCGCGGCAAGCTGCTGGTGCGCGAGCGCATCGACACCCTGCT CGACGCCGGCTCGGCCTTTCTCGAACTCGCGCCGCTGGCCGCCCATGAGGTCTATGGCGAAGACGTCGCTGCTGCCGGCGTGGTGGCCGGTATCGGCCGC GTCGAAGGCGTCGAGTGCATGATCATCGCCAATGACGCCACCGTGAAAGGCGGCACCTACTACCCGCTGACGGTGAAGAAGCACCTGCGCGCGCAGACCG
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| Amino Acid Sequence |
>isovaleryl-CoA dehydrogenase
MNYSSLNFALGETIDMLREQVQAFVAAELAPRAEAIDQDNLFPADMWKKFGEMGLLGVTVSEEYGGAGLGYLAHVVAMEEISRGSASVALSYGAHSNLCV NQINRNGNPEQKARYLPKLISGEHVGALAMSEPNAGSDVVSMKLRAEKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGITAFIVERDWKGFSR GNKFDKLGMRGSNTCELFFDDVEVPQENVLGVENGGVKVLMSGLDYERVVLAGGPTGIMQACLDVVVPYIHDRKQFGQSIGEFQFIQGKVADMYTQLNAS RAYLYAVAQACDRGETTRKDAAGVILYTAENATQMALQAIQILGGNGYINEFPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFNESR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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