Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCGGCTCGCCTGAGCCTCGCGTTTTTGTAGGGCTTGCCCATTGGCGACACGAGCCGTCCAAGGCTTATTTTTTTGTATTAGGAGCTAAGAGCCCATGAGT ATGCAGGACCCGTTAGCGGACATGCTAACTCGTATCCGTAATGCCCAGATGGCCGAAAAGTCCGTCGTAAGCATGCCGTCTTCCACTCTGAAGGTGGCTG TGGCCAACGTTCTTCAGGGTGAAGGCTATATCGCGGGATACCAGGTCAGTGGCGACGCCAAGCCGCAACTGTCCATCGAGCTGAAGTATTTCGAAGGCCG TCCGGTCATCGAGGAACTCAAGCGCGTAAGCCGTCCTGGCCTTCGCCAGTACAAATCCGTTGATCAGTTGCCGAAAGTTCGCGGCGGTCTGGGTGTTTCG ATCGTGTCCACCAATAAGGGTGTGATGACTGATCGGGCTGCTCGCGCTGCTGGCGTTGGCGGCGAAGTGCTCTGCACTGTGTTCTAAGGGGGGGATAAGC
|
|
DNA Sequence for Gene |
>UIB01_RS17755
ATGTCTCGCGTTGCTAAGAACCCCGTCAAGCTGCCAGCTGGCGTCGAAATCAAGATGTCCGGTCAGCAGCTTTCGGTGAAGGGCGCAAAAGGCGCTCTCG AACTGAATGTTCATCCGTCCGTGGAAGTAATCCAGGAGTCTGGTGAGCTGCGTTTTGCTGGCCGTAATGGCGATCAGCAAACTCGCGCCATGGCTGGTAC TACCCGTGCTCTGGTCAATAACATGGTGATTGGCGTCAGCCAGGGCTTCGAGCGCAAGCTCCAGCTGGTTGGTGTTGGTTACAAGGCGCAAGCCAAAGGT CAAGTGCTGTCCCTGGCTCTCGGTTTCTCGCATCCGGTGGATTACGAACTGCCGCAAGGCGTTACCGCTGAGACCCCCAGCCAGACCGATATCCTGATCA AGGGTGTCGACAAGCAACTGGTCGGTCAGGTGGCTGCTGAAATCCGCGACTTCCGTCGTCCTGAGCCTTACAAGGGCAAGGGTGTGCGGTACTCGGATGA AGTAGTCCGTCGCAAAGAAGCTAAGAAGAAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGCATAGCAAATGAGCGTAAAGAAAGAAACTCGTCTGCGTCGCGCTCGCAAGGCACGCCTGAAGATGCGCGAGCTGGAAACCGTACGCCTCTGCGTGTAC CGCTCTTCCCAGCACATCTACGCCCAGGTCCTTTCGGCCGACGGCGGCAAGGTCCTGGCCAGCGCCTCGACTCTGGACAAAGAACTGCGTGACGCTGCTA CTGGCAACGTCGACGCTGCCAAGAAGGTCGGTCAGCTGGTCGCTGAGCGCGCGAAAGCCGCAGGTGTCACCCAGGTGGCGTTCGACCGTTCTGGCTTCAA GTACCACGGTCGTGTGAAGGCACTGGCTGATGCTGCTCGTGAAGGCGGGCTGGAGTTCTAAGTTATGGCAAATAACGAGCAAAAGCGCGACGAAGGCTAC ATCGAGAAGCTGGTTCAAGTTAACCGCGTCGCAAAAACTGTTAAAGGTGGTCGTATCTTCACCTTCACCGCACTGACTGTGGTGGGTGATGGCAAGGGTC
|
|
Amino Acid Sequence |
>50S ribosomal protein L6
MSRVAKNPVKLPAGVEIKMSGQQLSVKGAKGALELNVHPSVEVIQESGELRFAGRNGDQQTRAMAGTTRALVNNMVIGVSQGFERKLQLVGVGYKAQAKG QVLSLALGFSHPVDYELPQGVTAETPSQTDILIKGVDKQLVGQVAAEIRDFRRPEPYKGKGVRYSDEVVRRKEAKKK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|