Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATTCCACCAGCCAGTTCCTTGGTGCCGGCCTGGGGGGCGTGCTGGGCGGCGTCCTGTATCAACAGGGCGGCCTGGCGTTGGTCTTCGCCGGCTGCGCAGC ACTCTGTGCGCTGTGGTTCCTGGTCGCCTTCAGCATGCGCGAGCCCCCTTATGTAACCAGCCTGCGCTTGCCGCTCTCCAGCGGTGCGCTGGCCAATTCC GGGCTCAGTGATGAGTTGCTGCAAGTTGCTGGGGTCAGCGATGTACTGATCGTTCTTGACGAAGCCGCGGCCTACATCAAGGTCGATACGCAGCAGCTGG ATCGTGATGCGCTGGACCGTCTGGTCGCTTGACCGTTCTATGCTTGCGGCAGCCGCAGGTGCGGAACCCGGCGCAACTTGAAGGGGCGTCGGTTGGTTGT CAGGGGTGGCTGAGGTAAGATTCGCGGTCATCGGGTTCGCTGGTAGCAGGACCGCCATCGGTGAGCCCACTTAATTTCATTGTTCCAAGAGGAGTTACCC
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DNA Sequence for Gene |
>UIB01_RS17675
ATGGCCAGAGGGGTGAATAAAGTCATCTTGATCGGCAATGTCGGCGGCGACCCGGAAACCCGCTACATGCCCAATGGCAATGCGGTGACCAACATCACGC TGGCAACCACCGATAGCTGGAAGGACAAGCAGACCGGCCAGCTACAGGAACGCACCGAGTGGCACCGCGTCGTACTGTTCGGCAAGGTCGCCGAGATCGC CGGCGAATACCTGCGCAAGGGCTCGCAGTGCTACATCGAAGGCCGTCTGCAGACTCGTGAGTGGGAGAAGGACGGCGTCAAGCGCTACACCACCGAAATC GTCGTCGACATGAACGGCAGCATGCAGCTGCTCGGCGGTCGTGGCGGCAGTTCCGATGATGCTCCGCGTCAAGCTCGTCCGCAGCAGCGAGAGCCGCAGC AGGCGCCGCGTCAGCAGGCTCAGCCGCAGCAGCCCGCTGCACGGCAACAGCCGGCGCCGGACTACGACAGCTTCGACGACGACATCCCCTTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGTGTTCTGAATGCGAATGCGCCTGATGCTGTTGGGCGGCGGCAATGCCCTGGGCCAGGCGCTCATCCGCCTCGGCGCCGAGGAAGATATCGGCTTTCTC GCGCCGCGCCCGCCCGCCCAGGGCTGGGATGCCGCCAGTCTCACCCAGTTGCTCGATGACAACCGTCCGGATGTCGTGGTCAACCTTGCCTACTATTACG ACTGGTTCCAGAGCGGGCAGCCCAACGAGCCGGCGCTCGCAGCGCAGGAGCGGGCAGTCGAGCGTCTCGCCGAGCTTTGTCAGCACCACGATTTCGTCTT GTTGCAGCCATCGAGCTACCGCGTATTTGACGGTGCGCGGACCACGGCGTACAGCGAGAAGGACGAAGTCGCACCGCTGGATGCGCGGGGCAGGGCGCTC TGGCGCATTGAGCAGAGCGTGCGCTCGCTATGTCCGCGCCACGTGCTGCTGCGCTTTGGCTGGCTGCTCGATGACAGTCGCGACGGTGTATTGGGGCGTG
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Amino Acid Sequence |
>single stranded DNA-binding protein
MARGVNKVILIGNVGGDPETRYMPNGNAVTNITLATTDSWKDKQTGQLQERTEWHRVVLFGKVAEIAGEYLRKGSQCYIEGRLQTREWEKDGVKRYTTEI VVDMNGSMQLLGGRGGSSDDAPRQARPQQREPQQAPRQQAQPQQPAARQQPAPDYDSFDDDIPF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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